Geomicrobium sp. JCM 19038

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19038 is a notable bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its genomic data can be accessed through the accession number BAXA00000000.1. This organism is part of the genus Geomicrobium, which is known for its potential roles in biogeochemical cycling and interactions with the environment. The presence of only one replicon suggests that Geomicrobium sp. JCM 19038 may possess a simpler genetic framework compared to other bacteria that have multiple replicons. This can imply a more efficient replication process, which may contribute to its adaptability and survival in various ecological niches. The ecological significance of Geomicrobium species often revolves around their involvement in mineral transformations and nutrient cycling, particularly in marine and sedimentary environments. In summary, Geomicrobium sp. JCM 19038, with its single replicon and specific genomic information, represents an interesting subject for further study in microbial ecology. Understanding its genetic traits could provide insights into its ecological roles, particularly in biogeochemical processes, and enhance our knowledge of microbial diversity and function in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19038 DNA, contig: JCM19038.contig00037,

Gene Summary

Adenine Count

1158452 bp

Thymine Count

1096318 bp

Guanine Count

869156 bp

Cytosine Count

748694 bp

Genome Length

3872620 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJCM19038_4077Not AvailableNegative3676790 - 367786642183.0
lysophospholipaseJCM19038_4078Not AvailableNegative3677891 - 367867530732.9
carbonic anhydrase, family 3JCM19038_4079Not AvailablePositive3678844 - 367931416972.5
aminopeptidase sJCM19038_4080Not AvailablePositive3679372 - 368060445436.1
two-component response regulatorJCM19038_4081Not AvailableNegative3680883 - 368150023169.1
two-component sensor histidine kinaseJCM19038_4082Not AvailableNegative3681497 - 368232130919.3
abc-type multidrug transport system, permease componentJCM19038_4083Not AvailableNegative3682626 - 368331426357.2
multidrug abc transporter permeaseJCM19038_4084Not AvailableNegative3683311 - 368404227165.4
abc transporter, atp-binding proteinJCM19038_4085Not AvailableNegative3684039 - 368500135174.7
s-adenosylmethionine synthetaseJCM19038_4086Not AvailableNegative3685149 - 368637244798.1

Displaying genes 3921 – 3930 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.