Geomicrobium sp. JCM 19038

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19038 is a notable bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its genomic data can be accessed through the accession number BAXA00000000.1. This organism is part of the genus Geomicrobium, which is known for its potential roles in biogeochemical cycling and interactions with the environment. The presence of only one replicon suggests that Geomicrobium sp. JCM 19038 may possess a simpler genetic framework compared to other bacteria that have multiple replicons. This can imply a more efficient replication process, which may contribute to its adaptability and survival in various ecological niches. The ecological significance of Geomicrobium species often revolves around their involvement in mineral transformations and nutrient cycling, particularly in marine and sedimentary environments. In summary, Geomicrobium sp. JCM 19038, with its single replicon and specific genomic information, represents an interesting subject for further study in microbial ecology. Understanding its genetic traits could provide insights into its ecological roles, particularly in biogeochemical processes, and enhance our knowledge of microbial diversity and function in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19038 DNA, contig: JCM19038.contig00037,

Gene Summary

Adenine Count

1158452 bp

Thymine Count

1096318 bp

Guanine Count

869156 bp

Cytosine Count

748694 bp

Genome Length

3872620 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJCM19038_3663Not AvailablePositive3315060 - 33152125434.41
formamidaseJCM19038_3664Not AvailableNegative3315227 - 331641143329.2
hypothetical proteinJCM19038_3665Not AvailablePositive3316757 - 331792342554.7
methyltransferaseJCM19038_3666Not AvailablePositive3318133 - 331881925954.2
poly-gamma-glutamate synthase subunit pgsb/capbJCM19038_3667Not AvailablePositive3319270 - 332047244695.7
poly-gamma-glutamate synthase subunit pgsc/capcJCM19038_3668Not AvailablePositive3320631 - 332095411945.2
gamma-glutamyltranspeptidaseJCM19038_3670Not AvailablePositive3321156 - 332275758682.9
hypothetical proteinJCM19038_3671Not AvailablePositive3322952 - 332439752593.8
lead, cadmium, zinc and mercury transporting atpaseJCM19038_3672Not AvailablePositive3324494 - 332692487432.7
putative secreted proteinJCM19038_3673Not AvailablePositive3326921 - 332773330557.5

Displaying genes 3531 – 3540 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.