Geomicrobium sp. JCM 19038

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19038 is a notable bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its genomic data can be accessed through the accession number BAXA00000000.1. This organism is part of the genus Geomicrobium, which is known for its potential roles in biogeochemical cycling and interactions with the environment. The presence of only one replicon suggests that Geomicrobium sp. JCM 19038 may possess a simpler genetic framework compared to other bacteria that have multiple replicons. This can imply a more efficient replication process, which may contribute to its adaptability and survival in various ecological niches. The ecological significance of Geomicrobium species often revolves around their involvement in mineral transformations and nutrient cycling, particularly in marine and sedimentary environments. In summary, Geomicrobium sp. JCM 19038, with its single replicon and specific genomic information, represents an interesting subject for further study in microbial ecology. Understanding its genetic traits could provide insights into its ecological roles, particularly in biogeochemical processes, and enhance our knowledge of microbial diversity and function in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19038 DNA, contig: JCM19038.contig00037,

Gene Summary

Adenine Count

1158452 bp

Thymine Count

1096318 bp

Guanine Count

869156 bp

Cytosine Count

748694 bp

Genome Length

3872620 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJCM19038_2340Not AvailablePositive2169709 - 21699459146.79
transcriptional regulator, tetr familyJCM19038_2341Not AvailablePositive2170012 - 217059022266.5
hypothetical proteinJCM19038_2342Not AvailablePositive2170615 - 21708549427.12
diaminopimelate epimeraseJCM19038_2343Not AvailablePositive2170865 - 217171830687.6
hypothetical proteinJCM19038_2344Not AvailablePositive2172041 - 217229810140.1
butyryl-coa dehydrogenaseJCM19038_2345Not AvailablePositive2172486 - 217370044733.2
l-carnitine dehydratase/bile acid-inducible protein fJCM19038_2346Not AvailablePositive2173719 - 217490643678.8
cytosol aminopeptidase pepaJCM19038_2347Not AvailablePositive2175018 - 217650553178.7
hypothetical proteinJCM19038_2348Not AvailablePositive2176526 - 217683711316.5
thiamine pyrophosphate-requiring enzymeJCM19038_2350Not AvailablePositive2177071 - 217785928364.9

Displaying genes 2361 – 2370 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.