Geomicrobium sp. JCM 19038

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19038 is a notable bacterium characterized by a single replicon, indicating a streamlined genomic organization. Its genomic data can be accessed through the accession number BAXA00000000.1. This organism is part of the genus Geomicrobium, which is known for its potential roles in biogeochemical cycling and interactions with the environment. The presence of only one replicon suggests that Geomicrobium sp. JCM 19038 may possess a simpler genetic framework compared to other bacteria that have multiple replicons. This can imply a more efficient replication process, which may contribute to its adaptability and survival in various ecological niches. The ecological significance of Geomicrobium species often revolves around their involvement in mineral transformations and nutrient cycling, particularly in marine and sedimentary environments. In summary, Geomicrobium sp. JCM 19038, with its single replicon and specific genomic information, represents an interesting subject for further study in microbial ecology. Understanding its genetic traits could provide insights into its ecological roles, particularly in biogeochemical processes, and enhance our knowledge of microbial diversity and function in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19038 DNA, contig: JCM19038.contig00037,

Gene Summary

Adenine Count

1158452 bp

Thymine Count

1096318 bp

Guanine Count

869156 bp

Cytosine Count

748694 bp

Genome Length

3872620 bp

Protein-coding Genes

4017 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp phosphoribosyltransferase regulatory subunitJCM19038_975Not AvailablePositive918973 - 92014843974.7
atp phosphoribosyltransferaseJCM19038_976Not AvailablePositive920145 - 92078823814.7
histidinol dehydrogenaseJCM19038_977Not AvailablePositive920778 - 92205846191.9
imidazoleglycerol-phosphate dehydrataseJCM19038_978Not AvailablePositive922058 - 92264821641.0
imidazole glycerol phosphate synthase amidotransferase subunitJCM19038_979Not AvailablePositive922649 - 92328423390.0
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseJCM19038_980Not AvailablePositive923287 - 92403827582.8
imidazole glycerol phosphate synthase cyclase subunitJCM19038_981Not AvailablePositive924020 - 92477827204.3
phosphoribosyl-amp cyclohydrolaseJCM19038_982Not AvailablePositive924775 - 92539823668.9
proline/sodium symporter putpJCM19038_984Not AvailablePositive925674 - 92718155017.7
d-amino acid dehydrogenase large subunitJCM19038_985Not AvailablePositive927320 - 92854046951.8

Displaying genes 1051 – 1060 of 4141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.