Amycolatopsis lurida NRRL 2430

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis lurida NRRL 2430 is a mesophilic actinobacterium characterized by its ability to form spores. This organism possesses flagella, which suggests a motile characteristic, although the specific implications of this motility in its ecological niche have not been detailed. The optimal temperature for growth is noted to be 29°C, indicating its preference for moderate temperatures typical of mesophilic microbes. The strain is defined by a single replicon, which is indicative of its genomic structure. The genomic information is accessible under the accession number JFBM00000000.1, allowing for further investigation into its genetic makeup. Sporulation capability is a significant trait as it allows the bacterium to survive in adverse conditions, facilitating its persistence in various environments. The presence of flagella in conjunction with its spore-forming ability may provide insights into the ecological roles of A. lurida. The ability to move and form spores could enable this bacterium to colonize new habitats efficiently and endure unfavorable conditions. Overall, Amycolatopsis lurida NRRL 2430 exemplifies the adaptive strategies of actinobacteria, combining motility with reproductive resilience, which are important traits for survival in diverse ecological contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis lurida
StrainNRRL 2430

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis lurida NRRL 2430 contig00101, whole genome shotgun

Gene Summary

Adenine Count

1403380 bp

Thymine Count

1408947 bp

Guanine Count

3094748 bp

Cytosine Count

3080581 bp

Genome Length

8987656 bp

Protein-coding Genes

8124 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBB31_04420Not AvailablePositive878922 - 87986334041.1
hypothetical proteinBB31_04425Not AvailableNegative879919 - 88057222231.6
peptide abc transporter permeaseBB31_04430Not AvailableNegative880648 - 88156832525.0
peptide abc transporter permeaseBB31_04435Q53191Negative881565 - 88250934060.8
abc transporter peptide-binding proteinBB31_04440P55669Negative882506 - 88408656874.5
glutathione abc transporter atp-binding proteinBB31_04445Q8X6W1Negative884083 - 88582563302.2
polyketide biosynthesis methyltransferaseBB31_04450Not AvailablePositive886060 - 88704634924.4
lipaseBB31_04455Not AvailablePositive887043 - 88801734652.8
tetr family transcriptional regulatorBB31_04460Not AvailableNegative888345 - 88893222158.6
amidohydrolaseBB31_04465Q68AP4Negative888974 - 89060857409.8

Displaying genes 911 – 920 of 8206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

533 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000333(1R,4R)-bornane-2,5-dioneC10H14O2Chemical structure of (1R,4R)-bornane-2,5-dioneNot available
Average166.22Da
Monoisotopic166.0993797Da
BASm0000338(1R,4R,5R)-5-hydroxycamphorC10H16O2Chemical structure of (1R,4R,5R)-5-hydroxycamphorNot available
Average168.2328Da
Monoisotopic168.115029756Da

Displaying 1–10 of 533 metabolites

Health Effects

No health effects information available for this bacterium.