Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis lurida |
| Strain | NRRL 2430 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1403380 bp
Thymine Count
1408947 bp
Guanine Count
3094748 bp
Cytosine Count
3080581 bp
Genome Length
8987656 bp
Protein-coding Genes
8124 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s ferredoxin | BB31_07160 | Not Available | Negative | 1475896 - 1476909 | 36883.2 |
| merr family transcriptional regulator | BB31_07165 | Q53W62 | Negative | 1476979 - 1477860 | 31919.2 |
| geranylgeranyl pyrophosphate synthase | BB31_07170 | O53507 | Positive | 1478318 - 1479400 | 38909.2 |
| phytoene dehydrogenase | BB31_07175 | Not Available | Positive | 1479397 - 1480914 | 53839.5 |
| phytoene synthase | BB31_07180 | Not Available | Positive | 1480911 - 1481873 | 35711.8 |
| lycopene cyclase | BB31_07185 | Not Available | Positive | 1481874 - 1482215 | 12499.8 |
| lycopene cyclase | BB31_07190 | Not Available | Positive | 1482212 - 1482532 | 12072.0 |
| ubiquinone biosynthesis methyltransferase ubie | BB31_07195 | Q8KF69 | Positive | 1482529 - 1483260 | 26418.6 |
| isorenieratene synthase | BB31_07200 | P72449 | Positive | 1483257 - 1484825 | 56876.0 |
| cyclase | BB31_07205 | Not Available | Negative | 1484888 - 1485358 | 17722.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
