Helicobacter valdiviensis str. WBE14

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter valdiviensis str. WBE14 is a bacterium characterized by a single replicon. It has been cataloged under the accession number NBIU00000000.1, which allows for its identification and further study within genomic databases. As a member of the Helicobacter genus, H. valdiviensis is likely to share some phenotypic and ecological characteristics with other species in this group, known for their association with the gastrointestinal tracts of various hosts. While specific ecological niches or interactions of H. valdiviensis str. WBE14 have not been detailed in the provided information, Helicobacter species are often associated with both commensal and pathogenic relationships in their environments. The existence of a single replicon suggests a streamlined genomic architecture, which may have implications for its adaptability and survival in its specific ecological niche. This trait may contribute to the bacterium's evolutionary strategies, potentially influencing its ecological role and interactions within microbial communities. In summary, H. valdiviensis str. WBE14 is defined by its single replicon and accession number NBIU00000000.1, placing it within the broader context of Helicobacter species, which are significant in the gastrointestinal microbiome. Understanding its genomic framework could provide insights into its ecological dynamics and potential roles in its environment.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter valdiviensis
StrainWBE14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter valdiviensis str. WBE14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter valdiviensis strain WBE14 contig140, whole genome

Gene Summary

Adenine Count

750444 bp

Thymine Count

737747 bp

Guanine Count

363015 bp

Cytosine Count

330085 bp

Genome Length

2181291 bp

Protein-coding Genes

2065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
delta-aminolevulinic acid dehydrataseB6S12_09225Not AvailablePositive1864761 - 186572935935.7
dna starvation/stationary phase protection proteinB6S12_09230Not AvailableNegative1866388 - 186682516423.8
gtp 3',8-cyclase moaaB6S12_09235Not AvailableNegative1866938 - 186790336490.8
molybdopterin-guanine dinucleotide biosynthesis protein mobaB6S12_09240Not AvailablePositive1868507 - 186901319520.7
flagellar biosynthesis protein flhbB6S12_09245Not AvailablePositive1869006 - 187007640534.2
ribonuclease jB6S12_09250Not AvailableNegative1870083 - 187207175109.9
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseB6S12_09255Not AvailableNegative1872083 - 187287429778.5
prepilin-type cleavage/methylation domain-containing proteinB6S12_09260Not AvailableNegative1872920 - 187361526939.6
threonine ammonia-lyaseB6S12_09270Not AvailableNegative1874786 - 187599443722.1
coa-binding proteinB6S12_09275Not AvailableNegative1875991 - 187640415625.9

Displaying genes 1831 – 1840 of 2117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.