Helicobacter valdiviensis str. WBE14

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter valdiviensis str. WBE14 is a bacterium characterized by a single replicon. It has been cataloged under the accession number NBIU00000000.1, which allows for its identification and further study within genomic databases. As a member of the Helicobacter genus, H. valdiviensis is likely to share some phenotypic and ecological characteristics with other species in this group, known for their association with the gastrointestinal tracts of various hosts. While specific ecological niches or interactions of H. valdiviensis str. WBE14 have not been detailed in the provided information, Helicobacter species are often associated with both commensal and pathogenic relationships in their environments. The existence of a single replicon suggests a streamlined genomic architecture, which may have implications for its adaptability and survival in its specific ecological niche. This trait may contribute to the bacterium's evolutionary strategies, potentially influencing its ecological role and interactions within microbial communities. In summary, H. valdiviensis str. WBE14 is defined by its single replicon and accession number NBIU00000000.1, placing it within the broader context of Helicobacter species, which are significant in the gastrointestinal microbiome. Understanding its genomic framework could provide insights into its ecological dynamics and potential roles in its environment.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter valdiviensis
StrainWBE14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter valdiviensis str. WBE14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter valdiviensis strain WBE14 contig140, whole genome

Gene Summary

Adenine Count

750444 bp

Thymine Count

737747 bp

Guanine Count

363015 bp

Cytosine Count

330085 bp

Genome Length

2181291 bp

Protein-coding Genes

2065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
guanine permeaseB6S12_08310Not AvailableNegative1678787 - 168010347253.1
chemotaxis protein chewB6S12_08315Not AvailableNegative1681701 - 168219218810.9
chemotaxis protein cheaB6S12_08320Not AvailableNegative1682192 - 168460389309.2
fused signal transduction protein/response regulatorB6S12_08325Not AvailableNegative1684630 - 168560136528.9
metallophosphoesteraseB6S12_08330Not AvailableNegative1685588 - 168633429612.7
n-acetyl-gamma-glutamyl-phosphate reductaseB6S12_08335Not AvailableNegative1686324 - 168734037860.1
thiamine biosynthesis protein thisB6S12_08340Not AvailableNegative1687362 - 16875627510.13
udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferaseB6S12_08345Not AvailableNegative1687565 - 168887548596.8
motility protein aB6S12_08350Not AvailablePositive1689026 - 168979027556.0
flagellar motor protein motbB6S12_08355Not AvailablePositive1689799 - 169057829122.0

Displaying genes 1651 – 1660 of 2117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.