Helicobacter valdiviensis str. WBE14

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter valdiviensis str. WBE14 is a bacterium characterized by a single replicon. It has been cataloged under the accession number NBIU00000000.1, which allows for its identification and further study within genomic databases. As a member of the Helicobacter genus, H. valdiviensis is likely to share some phenotypic and ecological characteristics with other species in this group, known for their association with the gastrointestinal tracts of various hosts. While specific ecological niches or interactions of H. valdiviensis str. WBE14 have not been detailed in the provided information, Helicobacter species are often associated with both commensal and pathogenic relationships in their environments. The existence of a single replicon suggests a streamlined genomic architecture, which may have implications for its adaptability and survival in its specific ecological niche. This trait may contribute to the bacterium's evolutionary strategies, potentially influencing its ecological role and interactions within microbial communities. In summary, H. valdiviensis str. WBE14 is defined by its single replicon and accession number NBIU00000000.1, placing it within the broader context of Helicobacter species, which are significant in the gastrointestinal microbiome. Understanding its genomic framework could provide insights into its ecological dynamics and potential roles in its environment.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter valdiviensis
StrainWBE14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter valdiviensis str. WBE14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter valdiviensis strain WBE14 contig140, whole genome

Gene Summary

Adenine Count

750444 bp

Thymine Count

737747 bp

Guanine Count

363015 bp

Cytosine Count

330085 bp

Genome Length

2181291 bp

Protein-coding Genes

2065 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rip metalloprotease rsepB6S12_04920Not AvailablePositive1001388 - 100245839055.6
yggs family pyridoxal phosphate enzymeB6S12_04925Not AvailablePositive1002468 - 100313925578.3
peptide-methionine (r)-s-oxide reductaseB6S12_04930Not AvailablePositive1003195 - 100354813225.6
hypothetical proteinB6S12_04935Not AvailablePositive1003611 - 100420122581.2
leucyl aminopeptidaseB6S12_04940Not AvailablePositive1004198 - 100562251895.7
redox-regulated atpase ychfB6S12_04945Not AvailablePositive1005622 - 100672840685.8
hypothetical proteinB6S12_04950Not AvailableNegative1006937 - 100733814925.3
conjugal transfer protein tratB6S12_04955Not AvailablePositive1007425 - 100819227246.6
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobB6S12_04960Not AvailableNegative1008196 - 100911334844.9
hypothetical proteinB6S12_04965Not AvailableNegative1009094 - 10093158381.63

Displaying genes 991 – 1000 of 2117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.