Bifidobacterium longum subsp. infantis EK3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium longum subsp. infantis EK3 is a Gram-positive, anaerobic bacterium that exhibits a rod shape and typically forms clusters, pairs, or singles. This species is non-motile, meaning it does not have the capability to move independently. It possesses a single membrane and has one replicon. The optimal growth temperature for B. longum subsp. infantis EK3 is 37°C, placing it within the mesophilic temperature range. This bacterium is host-associated, indicating a relationship with specific hosts, likely contributing to the microbiota of the gastrointestinal tract in infants. Its free-living biotic relationship suggests that while it thrives in association with hosts, it can also survive independently in suitable environments. The presence of flagella, despite the lack of motility, raises interesting questions about its cellular structure and evolutionary adaptations. The accession number JNWB00000000.1 provides a reference for further genomic studies. From an ecological perspective, Bifidobacterium longum subsp. infantis EK3 plays a critical role in the gut microbiome, particularly in infants, where it may aid in digestion and nutrient absorption. Its presence is essential for maintaining gut health and may influence the development of the immune system. Understanding the characteristics of this bacterium can help elucidate its functions and contributions to the overall health of its host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium longum
Strainsubsp. infantis EK3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium longum subsp. infantis EK3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementClusters - Pairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium longum subsp. infantis EK3 seq38, whole genome

Gene Summary

Adenine Count

521019 bp

Thymine Count

520195 bp

Guanine Count

758779 bp

Cytosine Count

764167 bp

Genome Length

2564809 bp

Protein-coding Genes

1999 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorEK3BL_00320Not AvailablePositive67557 - 6820724042.6
glutaredoxinEK3BL_00325Not AvailablePositive68762 - 690289555.29
ribonucleotide reductaseEK3BL_00330Not AvailablePositive69025 - 6947716442.7
ribonucleotide-diphosphate reductase subunit alphaEK3BL_00335Not AvailablePositive69591 - 7178681536.1
ribonucleotide-diphosphate reductase subunit betaEK3BL_00345Not AvailablePositive72015 - 7300737684.0
glycosyl transferaseEK3BL_00350Not AvailablePositive73071 - 7424644309.1
sugar abc transporter atp-binding proteinEK3BL_00355Not AvailablePositive74604 - 7573140731.3
lipopolysaccharide kinaseEK3BL_00360Not AvailablePositive75952 - 7736453500.1
rna methyltransferaseEK3BL_00365Not AvailableNegative77471 - 7846335034.0
permeaseEK3BL_00370Not AvailablePositive78551 - 7976542838.5

Displaying genes 61 – 70 of 2059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.