Bifidobacterium longum subsp. infantis EK3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium longum subsp. infantis EK3 is a Gram-positive, anaerobic bacterium that exhibits a rod shape and typically forms clusters, pairs, or singles. This species is non-motile, meaning it does not have the capability to move independently. It possesses a single membrane and has one replicon. The optimal growth temperature for B. longum subsp. infantis EK3 is 37°C, placing it within the mesophilic temperature range. This bacterium is host-associated, indicating a relationship with specific hosts, likely contributing to the microbiota of the gastrointestinal tract in infants. Its free-living biotic relationship suggests that while it thrives in association with hosts, it can also survive independently in suitable environments. The presence of flagella, despite the lack of motility, raises interesting questions about its cellular structure and evolutionary adaptations. The accession number JNWB00000000.1 provides a reference for further genomic studies. From an ecological perspective, Bifidobacterium longum subsp. infantis EK3 plays a critical role in the gut microbiome, particularly in infants, where it may aid in digestion and nutrient absorption. Its presence is essential for maintaining gut health and may influence the development of the immune system. Understanding the characteristics of this bacterium can help elucidate its functions and contributions to the overall health of its host.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium longum
Strainsubsp. infantis EK3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium longum subsp. infantis EK3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementClusters - Pairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium longum subsp. infantis EK3 seq38, whole genome

Gene Summary

Adenine Count

521019 bp

Thymine Count

520195 bp

Guanine Count

758779 bp

Cytosine Count

764167 bp

Genome Length

2564809 bp

Protein-coding Genes

1999 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxygluconokinaseEK3BL_08355Not AvailablePositive2242979 - 224387532427.5
glycosyl hydrolaseEK3BL_08360Not AvailablePositive2244088 - 224538648802.0
n-acyl-d-glucosamine 2-epimeraseEK3BL_08365Not AvailablePositive2245453 - 224668845458.6
laci family transcriptional regulatorEK3BL_08370Not AvailableNegative2246772 - 224789340029.8
peptide abc transporter atpaseEK3BL_08375Not AvailableNegative2248087 - 224979962573.6
peptide abc transporter permeaseEK3BL_08380Not AvailableNegative2249805 - 225098641771.7
peptide abc transporter permeaseEK3BL_08385Not AvailableNegative2250988 - 225208239380.2
peptide abc transporter substrate-binding proteinEK3BL_08390Not AvailableNegative2252293 - 225391858427.0
alpha-mannosidaseEK3BL_08395Not AvailableNegative2254169 - 2257321116307.0
alpha-mannosidaseEK3BL_08400Not AvailableNegative2257446 - 2260565115331.0

Displaying genes 1791 – 1800 of 2059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.