Bifidobacterium longum subsp. infantis EK3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium longum subsp. infantis EK3 is a Gram-positive, rod-shaped bacterium that exhibits a varied cell arrangement, occurring in clusters, pairs, and singles. This subspecies is classified as an anaerobe, indicating that it thrives in environments devoid of oxygen, which is consistent with its habitat being primarily host-associated. Optimal growth occurs at a temperature of 37.0°C, aligning with the physiological conditions of the human gastrointestinal tract, where this microbe is commonly found. As a member of the Bifidobacterium genus, B. longum subsp. infantis EK3 plays a crucial role in the gut microbiota, particularly in infants. This subspecies is known to contribute to the maintenance of gut health by aiding in the digestion of lactose and other carbohydrates, potentially influencing the overall metabolic processes within the host. Furthermore, its anaerobic nature suggests a specialized adaptation to the gut environment, where oxygen levels are minimal. The presence of B. longum subsp. infantis EK3 in the gut microbiome may also reflect the evolutionary significance of such microbes in establishing a symbiotic relationship with their host, contributing to immune system development and modulation. Understanding these traits of B. longum subsp. infantis EK3 enhances our knowledge of its potential benefits in early life gut health and underscores the importance of maintaining a balanced microbiota for overall well-being.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium longum
Strainsubsp. infantis EK3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium longum subsp. infantis EK3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementClusters - Pairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium longum subsp. infantis EK3


Gene Summary

Adenine Count

521019 bp

Thymine Count

520195 bp

Guanine Count

758779 bp

Cytosine Count

764167 bp

Genome Length

2564809 bp

Protein-coding Genes

1999 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinEK3BL_00005Not Available+1 - 49618014.7
16s ribosomal rnaNot AvailableNot Available+211 - 1740Not Available
mfs transporterEK3BL_00010Not Available+942 - 222845992.2
23s ribosomal rnaNot AvailableNot Available+2168 - 5223Not Available
thioredoxin reductaseEK3BL_00015Not Available-2345 - 425566148.6
alkyl hydroperoxide reductaseEK3BL_00020Not Available-4424 - 498721243.8
carbonate dehydrataseEK3BL_00025Not Available+5193 - 587624873.1
5s ribosomal rnaNot AvailableNot Available+5405 - 5521Not Available
hypothetical proteinEK3BL_00030Not Available+6460 - 708022098.5
hypothetical proteinEK3BL_00035Not Available-7265 - 840140530.4

Displaying genes 1 – 10 of 2059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites