Bifidobacterium pseudocatenulatum IPLA36007

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum IPLA36007 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This species is notable for possessing flagella, which may play a role in its motility within anaerobic environments. The bacterium has a single replicon, indicating a streamlined genomic structure that is often seen in bacteria adapted to specific ecological niches. Bifidobacterium pseudocatenulatum IPLA36007 is part of the Bifidobacterium genus, which is commonly associated with the human gut microbiome and is known for its probiotic properties. These bacteria are vital for maintaining gut health, contributing to digestion, and inhibiting pathogenic bacteria. The accession number for this strain is JEOD00000000.1, which allows for further genomic research and study of its specific traits and functions. The presence of flagella in Bifidobacterium pseudocatenulatum IPLA36007 suggests an adaptation to its ecological niche, enabling it to navigate through the complex environments found in the gastrointestinal tracts of hosts. This motility could enhance the bacterium's survival and colonization capabilities, ultimately contributing to its role in gut health. Understanding the traits of Bifidobacterium pseudocatenulatum IPLA36007 can provide insights into the broader ecological dynamics of the gut microbiome and the potential benefits of this species in human health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
StrainIPLA36007

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum IPLA36007
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum IPLA36007


Gene Summary

Adenine Count

508661 bp

Thymine Count

508849 bp

Guanine Count

652560 bp

Cytosine Count

658108 bp

Genome Length

2328179 bp

Protein-coding Genes

1752 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Prophage antirepressorAW18_08375Not AvailablePositive1972763 - 197356329676.5
Helix-turn-helix dna binding proteinAW18_08380Not AvailablePositive1973556 - 19737748221.91
hypothetical proteinAW18_08385Not AvailablePositive1973771 - 19739506797.3
negative regulator of class i heat shock proteinAW18_08390Not AvailablePositive1973947 - 197458523407.9
Endonuclease yqaj superfamilyAW18_08400Not AvailablePositive1974737 - 197569936454.1
Dna binding phage related protein rectAW18_08405Not AvailablePositive1975702 - 197656832038.0
Ssdna binding proteinAW18_08410Not AvailablePositive1976568 - 197705317373.1
Hypothetical proteinAW18_08415Not AvailablePositive1977178 - 197756415112.8
hypothetical proteinAW18_08420Not AvailablePositive1977567 - 197786311198.2
Hypothetical proteinAW18_08425Not AvailablePositive1977860 - 197817111868.3

Displaying genes 1 – 10 of 1830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

19 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000841L-arabinono-1,4-lactoneC5H8O5Chemical structure of L-arabinono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.037173358Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001864Cr(6+)CrChemical structure of Cr(6+)Not available
Average51.9961Da
Monoisotopic51.9405119Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002147N-ethylsuccinimideC6H9NO2Chemical structure of N-ethylsuccinimide2314-78-5
Average127.1412Da
Monoisotopic127.0633285Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm00025382-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateC6H3O4Chemical structure of 2-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateNot available
Average139.087Da
Monoisotopic139.0036822Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da

Displaying 1–10 of 19 metabolites

Health Effects

No health effects information available for this bacterium.