Candidatus Rubidus massiliensis str. Rubis

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Chlamydiales

Family

Chlamydiaceae

Genus

Candidatus Rubidus

Description

Candidatus Rubidus massiliensis str. Rubis is a bacterium classified under the category of candidate species due to its incomplete characterization. It possesses a single replicon, indicating a simpler genomic structure compared to many other bacteria that may contain multiple replicons. The genomic data for this organism is cataloged under the accession CCSC00000000.1, which serves as a reference for researchers interested in studying its genetic makeup and potential applications. While specific traits and ecological roles of Candidatus Rubidus massiliensis str. Rubis are not detailed in the provided evidence, the presence of a single replicon may suggest a streamlined evolutionary path, possibly adapting to specific ecological niches. Bacteria with simpler genomes often exhibit specialized functionalities or adaptations that allow them to thrive in particular environments. The study of Candidatus Rubidus massiliensis str. Rubis could provide insights into microbial diversity and the evolutionary pressures that shape the genomic architecture of bacteria. Understanding such organisms can enhance our knowledge of microbial ecology and the potential roles they play in various ecosystems. The simplified genomic structure may also facilitate research into genome evolution and the adaptation mechanisms of bacteria, offering a window into the complexities of microbial life in diverse habitats.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusCandidatus Rubidus
SpeciesCandidatus Rubidus massiliensis
StrainRubis

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Rubidus massiliensis genome assembly, contig:

Gene Summary

Adenine Count

944741 bp

Thymine Count

955725 bp

Guanine Count

467856 bp

Cytosine Count

452899 bp

Genome Length

2821221 bp

Protein-coding Genes

2428 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine--trna ligaseBN1013_00017Not AvailablePositive16564 - 1831866335.0
hypothetical proteinBN1013_00018Not AvailablePositive18381 - 1907926167.3
hypothetical proteinBN1013_00019Not AvailablePositive19174 - 1958114747.3
acetoin dehydrogenase e2 subunit dihydrolipoyllysine-residue acetyltransferaseBN1013_00020Not AvailableNegative19603 - 2028926297.0
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseBN1013_00021Not AvailableNegative20294 - 2110330824.5
l-lysine 2,3-aminomutaseBN1013_00022Not AvailablePositive21174 - 2214837820.1
udp-n-acetylglucosamine 1-carboxyvinyltransferase 1BN1013_00023Not AvailableNegative22140 - 2351350026.9
non-canonical purine ntp pyrophosphataseBN1013_00024Not AvailablePositive23789 - 2435221658.2
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseBN1013_00025Not AvailablePositive24396 - 2488417545.2
sulfite reductaseBN1013_00026Not AvailableNegative24924 - 2606644764.3

Displaying genes 41 – 50 of 2489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.