Leptospirillum ferriphilum YSK

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Leptospirillum

Description

Leptospirillum ferriphilum YSK is a notable bacterium characterized by its single replicon, indicating a streamlined genome organization. It is cataloged under the accession number NZ_CP007243.1, which provides a reference for its genetic sequence and traits in genomic databases. This organism is recognized for its role in bioleaching, a process where microorganisms facilitate the extraction of metals from ores. Leptospirillum ferriphilum YSK has been specifically noted for its ability to oxidize ferrous iron, which is critical in bioleaching applications, particularly in environments rich in iron and other metals. The ecological significance of Leptospirillum ferriphilum YSK lies in its contribution to biogeochemical cycles, particularly in iron cycling. By participating in the oxidation of iron, this bacterium plays a role in the microbial community dynamics found in extreme environments, such as acidic mine drainage sites. Its metabolic processes not only enhance metal recovery but also contribute to the environmental remediation of contaminated sites, making it an important organism in both industrial applications and environmental microbiology. In summary, Leptospirillum ferriphilum YSK is a single-replicon bacterium instrumental in bioleaching and iron cycling, underscoring its ecological importance in extreme environments and its potential in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusLeptospirillum
SpeciesLeptospirillum ferriphilum
StrainYSK

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leptospirillum ferriphilum YSK chromosome, complete genome.

Gene Summary

Adenine Count

529624 bp

Thymine Count

531918 bp

Guanine Count

635388 bp

Cytosine Count

633655 bp

Genome Length

2330585 bp

Protein-coding Genes

2225 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbitY981_RS11555Not AvailablePositive2301302 - 230191922494.4
cobalt-precorrin 5a hydrolaseY981_RS11560Not AvailablePositive2301916 - 230305240738.6
precorrin-3b c(17)-methyltransferaseY981_RS11565Not AvailablePositive2303094 - 230391529969.5
cob(i)yrinic acid a,c-diamide adenosyltransferaseY981_RS11570Not AvailablePositive2303912 - 230445119960.2
peptide deformylaseY981_RS11575Not AvailablePositive2304451 - 230500521149.6
orotidine-5'-phosphate decarboxylaseY981_RS11580Not AvailableNegative2305002 - 230574527200.9
50s ribosomal protein l11 methyltransferaseY981_RS12220Not AvailableNegative2305754 - 230662932158.8
secondary thiamine-phosphate synthase enzyme yjbqY981_RS11590Not AvailableNegative2306626 - 230707216875.1
redoxin domain-containing proteinY981_RS12225Not AvailableNegative2307059 - 230810538896.6
2'-5' rna ligase family proteinY981_RS12780Not AvailablePositive2308222 - 230883623121.8

Displaying genes 2251 – 2260 of 2282 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.