Leptospirillum ferriphilum YSK

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Leptospirillum

Description

Leptospirillum ferriphilum YSK is a notable bacterium characterized by its single replicon, indicating a streamlined genome organization. It is cataloged under the accession number NZ_CP007243.1, which provides a reference for its genetic sequence and traits in genomic databases. This organism is recognized for its role in bioleaching, a process where microorganisms facilitate the extraction of metals from ores. Leptospirillum ferriphilum YSK has been specifically noted for its ability to oxidize ferrous iron, which is critical in bioleaching applications, particularly in environments rich in iron and other metals. The ecological significance of Leptospirillum ferriphilum YSK lies in its contribution to biogeochemical cycles, particularly in iron cycling. By participating in the oxidation of iron, this bacterium plays a role in the microbial community dynamics found in extreme environments, such as acidic mine drainage sites. Its metabolic processes not only enhance metal recovery but also contribute to the environmental remediation of contaminated sites, making it an important organism in both industrial applications and environmental microbiology. In summary, Leptospirillum ferriphilum YSK is a single-replicon bacterium instrumental in bioleaching and iron cycling, underscoring its ecological importance in extreme environments and its potential in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusLeptospirillum
SpeciesLeptospirillum ferriphilum
StrainYSK

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leptospirillum ferriphilum YSK chromosome, complete genome.

Gene Summary

Adenine Count

529624 bp

Thymine Count

531918 bp

Guanine Count

635388 bp

Cytosine Count

633655 bp

Genome Length

2330585 bp

Protein-coding Genes

2225 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseY981_RS05565Not AvailablePositive1131256 - 113282156431.5
phosphoribosylamine--glycine ligaseY981_RS05570Not AvailablePositive1132844 - 113412145056.9
l-threonylcarbamoyladenylate synthaseY981_RS11990Not AvailablePositive1134118 - 113473222222.2
peptidoglycan-binding domain-containing proteinY981_RS05580Not AvailablePositive1134908 - 113529113319.0
rsmd family rna methyltransferaseY981_RS11995Not AvailablePositive1135346 - 113591521249.6
pantetheine-phosphate adenylyltransferaseY981_RS05590Not AvailablePositive1135912 - 113641218845.2
pyridoxal phosphate-dependent aminotransferaseY981_RS05595Not AvailablePositive1136409 - 113762044091.0
fmdb family zinc ribbon proteinY981_RS05600Not AvailablePositive1137744 - 113806410930.8
abc transporter atp-binding proteinY981_RS05605Not AvailableNegative1138101 - 113882326271.6
lipoprotein-releasing abc transporter permease subunitY981_RS05610Not AvailableNegative1138820 - 114005845500.4

Displaying genes 1081 – 1090 of 2282 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.