Vibrio casei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio casei is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number FUKS00000000.1, which aids in the identification and classification of its genetic material within microbial databases. The ecological role of Vibrio casei may be significant, particularly in aquatic environments where members of the Vibrio genus are commonly found. Vibrio species are known for their diverse metabolic capabilities, which often allow them to occupy various ecological niches, including marine and estuarine habitats. The presence of a single replicon may suggest a specific evolutionary strategy that enables Vibrio casei to thrive in these environments, possibly through efficient resource utilization or rapid adaptability to changing conditions. In conclusion, while specific ecological interactions and physiological traits of Vibrio casei are not detailed in the provided information, its genetic characteristics, such as the single replicon, indicate potential ecological adaptations that could be explored further in future research. Understanding these traits may offer insights into the organism's role in its ecosystem and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio casei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio casei
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio casei strain JB196 genome assembly, contig: Scaffold51,

Gene Summary

Adenine Count

1167277 bp

Thymine Count

1149094 bp

Guanine Count

779715 bp

Cytosine Count

797728 bp

Genome Length

3893814 bp

Protein-coding Genes

3520 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease p protein componentFM109_03750Not AvailablePositive798256 - 79857912543.2
inner membrane protein translocase component yidc, long formFM109_03755Not AvailablePositive798806 - 80046162049.3
gtpase and trna-u34 5-formylation enzyme trmeFM109_03760Not AvailablePositive800598 - 80195949520.2
flavoprotein miocFM109_03765Not AvailablePositive801999 - 80243915716.6
trna uridine 5-carboxymethylaminomethyl modification enzyme gidaFM109_03770Not AvailablePositive802974 - 80486970217.9
rrna small subunit 7-methylguanosine (m7g) methyltransferase gidbFM109_03775Not AvailablePositive804866 - 80551624228.6
chromosome (plasmid) partitioning protein paraFM109_03780Not AvailablePositive805530 - 80630628416.5
chromosome (plasmid) partitioning protein parbFM109_03785Not AvailablePositive806346 - 80722432348.2
hypothetical proteinFM109_03790Not AvailablePositive807374 - 80771812763.1
atp synthase f0 sector subunit aFM109_03795Not AvailablePositive807731 - 80850728654.9

Displaying genes 821 – 830 of 3623 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.