Vibrio casei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio casei is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number FUKS00000000.1, which aids in the identification and classification of its genetic material within microbial databases. The ecological role of Vibrio casei may be significant, particularly in aquatic environments where members of the Vibrio genus are commonly found. Vibrio species are known for their diverse metabolic capabilities, which often allow them to occupy various ecological niches, including marine and estuarine habitats. The presence of a single replicon may suggest a specific evolutionary strategy that enables Vibrio casei to thrive in these environments, possibly through efficient resource utilization or rapid adaptability to changing conditions. In conclusion, while specific ecological interactions and physiological traits of Vibrio casei are not detailed in the provided information, its genetic characteristics, such as the single replicon, indicate potential ecological adaptations that could be explored further in future research. Understanding these traits may offer insights into the organism's role in its ecosystem and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio casei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio casei
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio casei strain JB196 genome assembly, contig: Scaffold51,

Gene Summary

Adenine Count

1167277 bp

Thymine Count

1149094 bp

Guanine Count

779715 bp

Cytosine Count

797728 bp

Genome Length

3893814 bp

Protein-coding Genes

3520 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-proline glycine betaine abc transport system permease protein prow (tc 3.a.1.12.1)FM109_01770Not AvailablePositive375069 - 37596232971.5
l-proline glycine betaine abc transport system permease protein prov (tc 3.a.1.12.1)FM109_01775Not AvailablePositive375962 - 37702039225.7
2-deoxyglucose-6-phosphate hydrolase ynicFM109_01780Not AvailableNegative377135 - 37778824132.3
dna ligase (atp)FM109_01785Not AvailablePositive378006 - 37889033340.8
multi antimicrobial extrusion protein (na(+)/drug antiporter), mate family of mdr efflux pumpsFM109_01790Not AvailableNegative379001 - 38037449779.6
hypothetical proteinFM109_01795Not AvailableNegative380506 - 3806465158.98
ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycationFM109_01800Not AvailableNegative381034 - 38189733015.9
lipoprotein nlpcFM109_01805Not AvailableNegative382047 - 38242714609.3
n-acetyl-d-glucosamine kinaseFM109_01810Not AvailablePositive382800 - 38372333361.8
hypothetical proteinFM109_01815Not AvailableNegative383802 - 38407110379.4

Displaying genes 431 – 440 of 3623 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.