Sphingobacterium sp. JB170

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium sp. JB170 is characterized as a rod-shaped bacterium. It possesses a single replicon, indicating its genetic structure is organized around one main circular DNA molecule. The genomic data for this strain is accessible under the accession number FUKU00000000.1. This species is part of the Sphingobacterium genus, which is known for its ability to degrade complex organic compounds, often found in various environments. The rod shape of Sphingobacterium sp. JB170 suggests it may have adaptations for motility or biofilm formation, traits that can enhance its survival in diverse ecological niches. The presence of only one replicon is characteristic of many bacteria and may suggest a streamlined genetic organization, which can contribute to efficient replication and resource management under varying environmental conditions. The ecological significance of Sphingobacterium sp. JB170 may lie in its role in nutrient cycling and organic matter decomposition in its habitat. In summary, Sphingobacterium sp. JB170's rod shape and single replicon structure highlight its potential adaptability and ecological function, particularly in the degradation of organic materials, contributing to the health and balance of microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp. JB170
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp. JB170
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium sp. JB170 genome assembly, contig: Scaffold78,

Gene Summary

Adenine Count

1288561 bp

Thymine Count

1263736 bp

Guanine Count

910797 bp

Cytosine Count

938610 bp

Genome Length

4401704 bp

Protein-coding Genes

4094 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFM107_05590Not AvailableNegative1161428 - 116273547338.8
glycoside hydrolase family 30, candidate beta-glycosidaseFM107_05595Not AvailableNegative1162771 - 116424054696.7
putative outer membrane protein, probably involved in nutrient bindingFM107_05600Not AvailableNegative1164282 - 116579957075.5
susc, outer membrane protein involved in starch bindingFM107_05605Not AvailableNegative1165812 - 1168787109082.0
regulatory protein susrFM107_05610Not AvailableNegative1168998 - 117062061527.3
putative 5'(3')-deoxyribonucleotidaseFM107_05615Not AvailablePositive1171340 - 117184619881.3
hypothetical proteinFM107_05620Not AvailableNegative1171965 - 117240217049.8
hypothetical proteinFM107_05625Not AvailableNegative1172497 - 117324328909.6
hypothetical proteinFM107_05630Not AvailableNegative1173236 - 117358313258.7
hypothetical proteinFM107_05635Not AvailableNegative1173687 - 11738004456.59

Displaying genes 1121 – 1130 of 4152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.