Pseudoalteromonas sp. JB197

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. JB197 is a rod-shaped bacterium that contains a single replicon, indicating a streamlined genetic structure. This species is classified under the genus Pseudoalteromonas, which is known for its ecological roles, particularly in marine environments. The genomic data for Pseudoalteromonas sp. JB197 is accessible under the accession number FUKV00000000.1, which provides a foundation for further research into its genetic characteristics and potential applications. The single replicon suggests a level of genetic stability, which may be relevant for its adaptability in its native habitat. In ecological contexts, members of the Pseudoalteromonas genus are often associated with marine organisms and environments, where they contribute to biogeochemical cycles and exhibit a range of biotechnological potential, including the production of bioactive compounds. Understanding the traits of Pseudoalteromonas sp. JB197 may offer insights into its ecological roles and interactions within marine ecosystems. Further research on this species could reveal its contributions to marine biodiversity and its potential uses in biotechnology, emphasizing the importance of studying microbial diversity in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. JB197
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. JB197 genome assembly, contig: Scaffold93,

Gene Summary

Adenine Count

1200910 bp

Thymine Count

1195137 bp

Guanine Count

798874 bp

Cytosine Count

797146 bp

Genome Length

3992067 bp

Protein-coding Genes

3683 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna 5-methylaminomethyl-2-thiouridine synthase tuscCZ797_16765Not AvailablePositive3591560 - 359191613500.5
trna 5-methylaminomethyl-2-thiouridine synthase tusbCZ797_16770Not AvailablePositive3591913 - 359220310735.7
trna 2-thiouridine synthesizing protein eCZ797_16775Not AvailablePositive3592207 - 359253612463.2
ribosomal large subunit pseudouridine synthase eCZ797_16780Not AvailablePositive3592536 - 359321925403.8
diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s)CZ797_16785Not AvailableNegative3593285 - 359455648196.7
pp_03307CZ797_16790Not AvailablePositive3594850 - 3595950Not Available
a protein of unknown function perhaps involved in purine metabolismCZ797_16795Not AvailablePositive3595950 - 359655222303.2
adenylosuccinate lyaseCZ797_16800Not AvailablePositive3596584 - 359795451500.6
hypothetical proteinCZ797_16805Not AvailablePositive3598044 - 359918943203.7
gnat family acetyltransferase yjcfCZ797_16810Not AvailablePositive3599199 - 359966617719.4

Displaying genes 3361 – 3370 of 3747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.