Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina siciliae |
| Strain | HI350 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1404214 bp
Thymine Count
1409056 bp
Guanine Count
1069973 bp
Cytosine Count
1057871 bp
Genome Length
4941115 bp
Protein-coding Genes
4144 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmde family protein | MSSIH_RS00260 | Not Available | Positive | 62219 - 62872 | 24385.1 |
| abc transporter substrate-binding protein | MSSIH_RS00265 | Not Available | Positive | 62874 - 64625 | 64251.1 |
| abc transporter permease | MSSIH_RS00270 | Not Available | Positive | 64642 - 65640 | 36970.8 |
| abc transporter permease | MSSIH_RS00275 | Not Available | Positive | 65643 - 66467 | 30024.4 |
| abc transporter atp-binding protein | MSSIH_RS00280 | Not Available | Positive | 66467 - 67420 | 35818.2 |
| abc transporter atp-binding protein | MSSIH_RS00285 | Not Available | Positive | 67423 - 68250 | 29966.6 |
| heat repeat domain-containing protein | MSSIH_RS00290 | Not Available | Negative | 68374 - 69825 | 51903.2 |
| prephenate dehydrogenase | MSSIH_RS00295 | Not Available | Negative | 69991 - 71421 | 52716.0 |
| shikimate dehydrogenase | MSSIH_RS00300 | Not Available | Negative | 71418 - 72260 | 29211.5 |
| type i 3-dehydroquinate dehydratase | MSSIH_RS00305 | Not Available | Negative | 72257 - 72985 | 25787.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
