Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | LYC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1199768 bp
Thymine Count
1235069 bp
Guanine Count
857474 bp
Cytosine Count
862033 bp
Genome Length
4154344 bp
Protein-coding Genes
3526 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii domain-containing protein | MSMAL_RS00220 | Not Available | Positive | 49515 - 50132 | 23601.8 |
| bifunctional 5,6,7,8-tetrahydromethanopterin hydro-lyase/3-hexulose-6-phosphate synthase | MSMAL_RS00225 | Not Available | Positive | 50436 - 51614 | 42462.5 |
| triose-phosphate isomerase | MSMAL_RS00230 | Not Available | Positive | 51664 - 52332 | 22940.8 |
| class i sam-dependent methyltransferase | MSMAL_RS00235 | Not Available | Positive | 52671 - 53417 | 28464.6 |
| heat repeat domain-containing protein | MSMAL_RS00240 | Not Available | Negative | 53564 - 55099 | 55173.8 |
| prephenate dehydrogenase | MSMAL_RS00245 | Not Available | Negative | 55174 - 56592 | 52643.9 |
| shikimate dehydrogenase | MSMAL_RS00250 | Not Available | Negative | 56589 - 57431 | 29621.1 |
| type i 3-dehydroquinate dehydratase | MSMAL_RS00255 | Not Available | Negative | 57428 - 58156 | 26182.0 |
| 3-dehydroquinate synthase ii | MSMAL_RS00260 | Not Available | Negative | 58217 - 59359 | 41165.5 |
| 2-amino-3,7-dideoxy-d-threo-hept-6-ulosonate synthase | MSMAL_RS00265 | Not Available | Negative | 59500 - 60297 | 28640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
