Methanosarcina mazei LYC

CocciNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina mazei LYC is a free-living anaerobic microbe classified as a lithotroph, indicating its ability to derive energy from inorganic compounds. This organism is characterized by its cocci shape and a single membrane structure. It has no mobility and does not possess flagella, which influences its ecological interactions within its habitat. The optimal growth temperature for Methanosarcina mazei LYC is 30°C, placing it within the mesophilic temperature range. This suggests that it thrives in environments with moderate temperatures, although specific habitat details are not provided. The organism has a single replicon, which is a notable genetic feature that can impact its replication and genetic stability. Given its anaerobic nature and lithotrophic energy source, Methanosarcina mazei LYC plays a significant role in biogeochemical cycles, particularly in environments where organic matter decomposition occurs under low-oxygen conditions. The ability to metabolize inorganic substrates may contribute to methane production, which is essential in various ecological contexts, including wetlands and anaerobic digesters. Overall, Methanosarcina mazei LYC exemplifies the diverse adaptations of microorganisms to anaerobic environments and highlights the importance of such organisms in methane generation and nutrient cycling in their respective ecosystems. The accession number for this strain is NZ_CP009513.1, which can be used for further research and genetic studies.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina mazei
StrainLYC

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanosarcina mazei LYC chromosome, complete genome.

Gene Summary

Adenine Count

1199768 bp

Thymine Count

1235069 bp

Guanine Count

857474 bp

Cytosine Count

862033 bp

Genome Length

4154344 bp

Protein-coding Genes

3526 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative beta-lysine n-acetyltransferaseMSMAL_RS02015Not AvailableNegative467765 - 46868535308.6
lysine 2,3-aminomutaseMSMAL_RS02020Not AvailableNegative468785 - 47004447798.4
monovalent cation:proton antiporter family proteinMSMAL_RS02025Not AvailablePositive471030 - 47302172581.3
duf1538 domain-containing proteinMSMAL_RS02030Not AvailablePositive473349 - 47404424577.2
duf1538 domain-containing proteinMSMAL_RS02035Not AvailablePositive474041 - 47477226142.0
p-ii family nitrogen regulatorMSMAL_RS02040Not AvailablePositive474762 - 47512412921.7
monovalent cation:proton antiporter family proteinMSMAL_RS02045Not AvailableNegative475351 - 47743876371.5
duf2178 domain-containing proteinMSMAL_RS02050Not AvailablePositive478170 - 47855313869.5
helix-turn-helix transcriptional regulatorMSMAL_RS02055Not AvailablePositive478555 - 4787587810.47
mm0924 family proteinMSMAL_RS02065Not AvailablePositive479230 - 4794096469.88

Displaying genes 401 – 410 of 3591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.