Methanosarcina mazei LYC

CocciNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina mazei LYC is a free-living anaerobic microbe classified as a lithotroph, indicating its ability to derive energy from inorganic compounds. This organism is characterized by its cocci shape and a single membrane structure. It has no mobility and does not possess flagella, which influences its ecological interactions within its habitat. The optimal growth temperature for Methanosarcina mazei LYC is 30°C, placing it within the mesophilic temperature range. This suggests that it thrives in environments with moderate temperatures, although specific habitat details are not provided. The organism has a single replicon, which is a notable genetic feature that can impact its replication and genetic stability. Given its anaerobic nature and lithotrophic energy source, Methanosarcina mazei LYC plays a significant role in biogeochemical cycles, particularly in environments where organic matter decomposition occurs under low-oxygen conditions. The ability to metabolize inorganic substrates may contribute to methane production, which is essential in various ecological contexts, including wetlands and anaerobic digesters. Overall, Methanosarcina mazei LYC exemplifies the diverse adaptations of microorganisms to anaerobic environments and highlights the importance of such organisms in methane generation and nutrient cycling in their respective ecosystems. The accession number for this strain is NZ_CP009513.1, which can be used for further research and genetic studies.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina mazei
StrainLYC

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanosarcina mazei LYC chromosome, complete genome.

Gene Summary

Adenine Count

1199768 bp

Thymine Count

1235069 bp

Guanine Count

857474 bp

Cytosine Count

862033 bp

Genome Length

4154344 bp

Protein-coding Genes

3526 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseMSMAL_RS16300Not AvailablePositive3794131 - 379524639935.5
abc transporter atp-binding proteinMSMAL_RS16305Not AvailablePositive3795239 - 379594926108.9
gnat family n-acetyltransferaseMSMAL_RS16310Not AvailableNegative3796018 - 379648217907.2
ribose 1,5-bisphosphate isomeraseMSMAL_RS16315Not AvailableNegative3796542 - 379746533281.9
helix-turn-helix transcriptional regulatorMSMAL_RS16320Not AvailableNegative3797563 - 379835130348.7
fmde family proteinMSMAL_RS16325Not AvailablePositive3799767 - 380036622171.4
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoMSMAL_RS16330Not AvailablePositive3800359 - 380079616918.2
cobaltochelatase subunit cobnMSMAL_RS16335Not AvailableNegative3800896 - 3805449167354.0
cobaltochelatase subunit cobnMSMAL_RS16345Not AvailableNegative3805972 - 3810318161626.0
nuclear transport factor 2 family proteinMSMAL_RS16350Not AvailablePositive3810781 - 381116414794.5

Displaying genes 3281 – 3290 of 3591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.