Methanosarcina lacustris Z-7289

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina lacustris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina lacustris Z-7289

Accession NumberNZ_CP009515.1

Gene Summary

Adenine Count

1207815 bp

Thymine Count

1200610 bp

Guanine Count

865468 bp

Cytosine Count

865915 bp

Genome Length

4139808 bp

Protein-coding Genes

3454 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
orc1-type dna replication proteinMSLAZ_RS00005Q8TUR2+721 - 196547030.2
dephospho-coa kinaseMSLAZ_RS00010P58831+2396 - 295620468.7
rna-binding domain-containing proteinMSLAZ_RS00015P58828+3085 - 356417239.9
sugar phosphate isomerase/epimerase family proteinMSLAZ_RS00020Q58707+3945 - 471829002.7
gamma-glutamylcyclotransferaseMSLAZ_RS00025Not Available-4763 - 526919665.2
elongation factor tuMSLAZ_RS00030Q57771-5404 - 646238695.9
phosphate uptake regulator phouMSLAZ_RS00035Not Available+7492 - 849637661.6
rna ligaseMSLAZ_RS00045Q57857-9126 - 1029845503.4
tigr00266 family proteinMSLAZ_RS00050Not Available+10483 - 1127427444.1
cbs domain-containing proteinMSLAZ_RS00055Q58622-11562 - 1233828666.8

Displaying genes 1 – 10 of 3517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

165 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0002546(indol-3-yl)acetyl-CoAC31H39N8O17P3SChemical structure of (indol-3-yl)acetyl-CoANot available
Average920.68Da
Monoisotopic920.1388683Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0002842UDP-alpha-D-xyloseC14H20N2O16P2Chemical structure of UDP-alpha-D-xyloseNot available
Average534.2599Da
Monoisotopic534.028805626Da
BASm0002844UDP-alpha-D-galacturonateC15H19N2O18P2Chemical structure of UDP-alpha-D-galacturonateNot available
Average577.262Da
Monoisotopic577.012456516Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm0002916N-formylmethanofuranC35H39N4O16Chemical structure of N-formylmethanofuranNot available
Average771.712Da
Monoisotopic771.238849091Da

Displaying 31–40 of 165 metabolites