Methanosarcina lacustris Z-7289

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina lacustris Z-7289 is a cocci-shaped archaeon that belongs to the Methanosarcina genus, known for its role in methane production. This organism possesses flagella, which may facilitate motility in its environment. A notable genetic characteristic of Methanosarcina lacustris Z-7289 is that it contains a single replicon, indicating a simplified genomic structure, which can be advantageous for efficient replication and adaptation. The accession number for the genomic information of Methanosarcina lacustris Z-7289 is NZ_CP009515.1, providing a reference for further studies and analyses of its genetic material. The organism's unique traits, including its morphology and flagellar presence, suggest adaptations that may be pivotal for survival in various ecological niches, particularly those rich in organic matter, where anaerobic conditions prevail. The ecological role of Methanosarcina lacustris Z-7289 highlights its contribution to the global carbon cycle, specifically through methanogenesis, a process that converts organic substrates into methane. This process is crucial not only for energy production in certain environments but also affects greenhouse gas emissions. Understanding the characteristics and behaviors of Methanosarcina lacustris Z-7289 can provide insights into methane production dynamics and the broader implications for ecosystems where this archaeon is present.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina lacustris
StrainZ-7289

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina lacustris Z-7289 chromosome, complete genome.

Gene Summary

Adenine Count

1207815 bp

Thymine Count

1200610 bp

Guanine Count

865468 bp

Cytosine Count

865915 bp

Genome Length

4139808 bp

Protein-coding Genes

3454 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetrahydromethanopterin s-methyltransferase subunit eMSLAZ_RS00410Q8TTZ9Positive94311 - 9522532481.5
tetrahydromethanopterin s-methyltransferase subunit dMSLAZ_RS00415Q8TU00Positive95222 - 9597125113.4
tetrahydromethanopterin s-methyltransferase subunit mtrcMSLAZ_RS00420Q8TU01Positive95974 - 9677426890.7
tetrahydromethanopterin s-methyltransferase subunit bMSLAZ_RS00425Q8TU02Positive96771 - 9709711695.2
tetrahydromethanopterin s-methyltransferase subunit aMSLAZ_RS00430Q8TU03Positive97099 - 9782125345.9
tetrahydromethanopterin s-methyltransferase subunit fMSLAZ_RS00435Q8TU04Positive97821 - 980457943.15
tetrahydromethanopterin s-methyltransferase subunit mtrgMSLAZ_RS00440Q8TU05Positive98063 - 982848111.07
tetrahydromethanopterin s-methyltransferase subunit hMSLAZ_RS00445P80650Positive98297 - 9924733959.8
hypothetical proteinMSLAZ_RS00455Not AvailablePositive100387 - 10152944540.9
rtcb family proteinMSLAZ_RS00460O29399Negative101601 - 10310354154.6

Displaying genes 81 – 90 of 3517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

165 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 165 metabolites

Health Effects

No health effects information available for this bacterium.