Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | HB-1 = JCM 15518 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate pyruvate-lyase family protein | MSHOH_RS03365 | Q58217 | Negative | 762748 - 763302 | 20965.7 |
| duf5611 family protein | MSHOH_RS03370 | Not Available | Negative | 763341 - 763655 | 12173.6 |
| hypothetical protein | MSHOH_RS23365 | Not Available | Positive | 763757 - 763909 | 5637.08 |
| pyridoxamine 5'-phosphate oxidase family protein | MSHOH_RS03375 | Q57730 | Positive | 764172 - 764573 | 14581.7 |
| atp-binding protein | MSHOH_RS21880 | Not Available | Negative | 764686 - 766089 | 52963.5 |
| spoiie family protein phosphatase | MSHOH_RS03385 | Not Available | Negative | 766097 - 766666 | 20889.8 |
| anti-sigma regulatory factor | MSHOH_RS03390 | P42411 | Negative | 766762 - 767160 | 14465.3 |
| stas domain-containing protein | MSHOH_RS03395 | P42410 | Negative | 767347 - 767730 | 13907.5 |
| pas domain-containing protein | MSHOH_RS03400 | P42409 | Negative | 767735 - 768541 | 29178.5 |
| hypothetical protein | MSHOH_RS03405 | Not Available | Positive | 768961 - 769263 | 11519.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
