Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | HB-1 = JCM 15518 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | MSHOH_RS25940 | Not Available | Negative | 1093062 - 1093364 | 11173.4 |
| peroxiredoxin | MSHOH_RS04915 | O29969 | Negative | 1093519 - 1094289 | 28502.3 |
| amidohydrolase family protein | MSHOH_RS04920 | Not Available | Negative | 1094603 - 1094923 | 11800.0 |
| hypothetical protein | MSHOH_RS21945 | Not Available | Positive | 1094910 - 1095203 | 10756.0 |
| winged helix dna-binding domain-containing protein | MSHOH_RS04930 | Not Available | Negative | 1095571 - 1096644 | 40677.0 |
| rida family protein | MSHOH_RS04935 | Not Available | Negative | 1096776 - 1097186 | 14720.8 |
| voc family protein | MSHOH_RS04940 | Not Available | Negative | 1097195 - 1097728 | 20082.8 |
| dihydrofolate reductase family protein | MSHOH_RS04945 | Not Available | Negative | 1097832 - 1098452 | 23026.8 |
| duf1579 family protein | MSHOH_RS22565 | Not Available | Negative | 1098502 - 1098978 | 17432.6 |
| alpha/beta fold hydrolase | MSHOH_RS04955 | Not Available | Negative | 1099137 - 1099763 | 23175.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
