Escherichia coli ISC7

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli ISC7 is a Gram-negative bacterium characterized by a rod shape and the presence of flagella, which enable mobility. It is classified as a facultative anaerobe, allowing it to thrive in environments with or without oxygen. ISC7 typically exists in pairs or as single cells, demonstrating a versatile cell arrangement. This strain is mesophilic, with an optimal growth temperature of 37°C, which aligns with the average human body temperature, indicating its typical association with host organisms. Given its habitat is categorized as host-associated, E. coli ISC7 likely interacts closely with biological hosts, contributing to its free-living biotic relationship. With a single replicon and a double membrane structure, ISC7 shares common features with other members of the Enterobacteriaceae family. Its ability to adapt to various environmental conditions and its metabolic flexibility underlines its ecological success in diverse habitats, particularly in association with hosts. Overall, the characteristics of E. coli ISC7 suggest that it plays a significant role in the microbial community of its host, potentially influencing host health and microbial dynamics. Such insights contribute to our understanding of the ecological roles of E. coli strains within their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainISC7

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli ISC7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli ISC7


Gene Summary

Adenine Count

1280268 bp

Thymine Count

1282866 bp

Guanine Count

1307622 bp

Cytosine Count

1314132 bp

Genome Length

5184957 bp

Protein-coding Genes

5912 genes

Non-Coding Genes

464 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinNONENot AvailablePositive194 - 3856869.27
Head-tail connector proteinNONENot AvailablePositive398 - 72112504.9
rrna,type:5sNot AvailableNot AvailablePositive599 - 71918.01
Putative phage head-tail adaptorNONENot AvailablePositive718 - 112815644.6
rrna,type:hypotheticalNot AvailableNot AvailablePositive1 - 93118.01
Trna-asp;Not AvailableNot AvailablePositive949 - 1022Not Available
Trna-tyr;Not AvailableNot AvailablePositive869 - 950Not Available
Hypothetical proteinNONENot AvailablePositive1103 - 160919785.9
Hypothetical proteinNONENot AvailablePositive1606 - 216620818.3
rrna,type:fig00638149:Not AvailableNot AvailablePositive193 - 173418.01

Displaying genes 1 – 10 of 6376 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.