Chlamydia pecorum DBDeUG

Rod

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Chlamydiales

Family

Chlamydiaceae

Genus

Chlamydia

Description

Chlamydia pecorum DBDeUG is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This organism is notable for having two replicons, which may contribute to its genetic diversity and adaptability. The strain is cataloged under accession numbers NZ_CM002308.1 and AZBB00000000.1, facilitating its identification and study in various genomic databases. The presence of flagella suggests potential motility, which is relatively uncommon among members of the Chlamydia genus, typically known for their obligate intracellular lifestyle. This trait could indicate unique adaptations within this specific strain, possibly influencing its ecological niche or its interactions with hosts. Understanding the characteristics of Chlamydia pecorum DBDeUG can provide insights into its role in the environment, particularly in relation to its pathogenic potential in various hosts. As a member of the Chlamydia genus, it may play a role in diseases affecting livestock and wildlife, impacting ecological balance and agricultural practices. Further research into this strain could elucidate its specific ecological interactions and potential implications for health in affected populations.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia pecorum
StrainDBDeUG

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Chlamydia pecorum DBDeUG
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chlamydia pecorum DBDeUG


Gene Summary

Adenine Count

322052 bp

Thymine Count

321143 bp

Guanine Count

223832 bp

Cytosine Count

225365 bp

Genome Length

1105101 bp

Protein-coding Genes

944 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malate dehydrogenaseCPECF_RS00005Not AvailableNegative143 - 112935967.0
hypothetical proteinCPECF_RS00010Not AvailableNegative1359 - 162810007.7
protein ltuaCPECF_RS05055Not AvailableNegative1728 - 18655133.35
glucose-6-phosphate isomeraseCPECF_RS00020Not AvailableNegative1958 - 353557761.2
site-specific tyrosine recombinase xerdCPECF_RS00025Not AvailablePositive3622 - 452134458.0
hypothetical proteinCPECF_RS00030Not AvailableNegative4518 - 481411389.5
Trna-leuNot AvailableNot AvailablePositive4900 - 4981Not Available
hypothetical proteinCPECF_RS00040Not AvailablePositive5172 - 661454014.1
sycd/lcrh family type iii secretion system chaperoneCPECF_RS00045Not AvailablePositive6614 - 713820726.5
hypothetical proteinCPECF_RS00050Not AvailablePositive7154 - 868957199.8

Displaying genes 1 – 10 of 1990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

82 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001140cyclohexyl isocyanideC7H11NChemical structure of cyclohexyl isocyanideNot available
Average109.1689Da
Monoisotopic109.089149357Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001358lactateC3H5O3Chemical structure of lactateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 82 metabolites

Health Effects

No health effects information available for this bacterium.