Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Loigolactobacillus

Description

Loigolactobacillus coryniformis subsp. torquens DSM 20004, also known as KCTC 3535, is a rod-shaped bacterium characterized by a single replicon. This taxon belongs to the genus Loigolactobacillus, which is part of the larger family of Lactobacillaceae. The strain is identified with the accession number NZ_CP017700.1, which is associated with its genomic data. The structural morphology of L. coryniformis subsp. torquens as a rod indicates its potential for specific ecological roles, particularly in fermentation processes, as is common with many Lactobacillus species. Rod-shaped bacteria often exhibit advantages in nutrient acquisition and biofilm formation, which could be crucial in natural environments such as the gastrointestinal tract of animals or in fermented food products. The single replicon characteristic suggests a streamlined genomic organization, which can enhance the efficiency of cellular processes. This trait may contribute to the adaptability of the organism in various environments, potentially allowing it to thrive in competitive microbial communities. Understanding the genomic and morphological traits of L. coryniformis subsp. torquens can provide insights into its ecological roles and applications in food science, particularly in the fermentation industry.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLoigolactobacillus
SpeciesLoigolactobacillus coryniformis
Strainsubsp. torquens DSM 20004 = KCTC 3535

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC

Gene Summary

Adenine Count

9822 bp

Thymine Count

9234 bp

Guanine Count

6166 bp

Cytosine Count

5400 bp

Genome Length

30622 bp

Protein-coding Genes

42 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication initiation proteinLC20004_RS15165Not AvailablePositive8091 - 858519050.8
replication initiation proteinLC20004_RS15170Not AvailableNegative8600 - 904617106.4
hypothetical proteinLC20004_RS15175Not AvailablePositive9182 - 968819047.5
replication initiation proteinLC20004_RS15180Not AvailableNegative9896 - 1026713472.8
type ii toxin-antitoxin system yafq family toxinLC20004_RS15185Not AvailableNegative10436 - 1079213823.4
type ii toxin-antitoxin system phd/yefm family antitoxinLC20004_RS15190Not AvailableNegative10792 - 1107010709.5
site-specific integraseLC20004_RS15195Not AvailablePositive11147 - 1173422480.2
hypothetical proteinLC20004_RS15200Not AvailablePositive11747 - 1211214393.1
hypothetical proteinLC20004_RS15205Not AvailablePositive12483 - 126958360.01
replication initiation proteinLC20004_RS15210Not AvailablePositive13413 - 1434836838.1

Displaying genes 11 – 20 of 42 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.