Ligilactobacillus aviarius subsp. aviarius DSM 20655

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Ligilactobacillus

Description

Ligilactobacillus aviarius subsp. aviarius DSM 20655 is a Gram-positive bacterium characterized by its rod shape and the presence of flagella. This species is classified under the genus Ligilactobacillus, which is known for its role in various ecological niches, particularly in the gastrointestinal tracts of birds. The organism has a single replicon, indicating a streamlined genetic structure that can offer advantages in terms of replication efficiency and adaptability. The accession number for the genomic sequence of Ligilactobacillus aviarius subsp. aviarius is AYZA00000000.1, allowing for easier reference and access to its genetic data for further studies and comparisons within the Lactobacillus group. The presence of flagella in Ligilactobacillus aviarius subsp. aviarius suggests potential motility, which may facilitate its colonization and persistence in the gut environment of avian hosts. This motility could also contribute to its ecological interactions, possibly influencing the microbial community structure within the gastrointestinal tract of birds. Understanding the traits of Ligilactobacillus aviarius subsp. aviarius helps elucidate its role in avian microbiomes and the broader ecological implications for nutrient absorption and gut health in birds. Further research could provide insights into its applications in promoting avian health or its potential use as a probiotic in poultry production.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLigilactobacillus
SpeciesLigilactobacillus aviarius
Strainsubsp. aviarius DSM 20655

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ligilactobacillus aviarius subsp. aviarius DSM 20655
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ligilactobacillus aviarius subsp. aviarius DSM 20655 NODE_116,

Gene Summary

Adenine Count

515475 bp

Thymine Count

490652 bp

Guanine Count

350360 bp

Cytosine Count

323620 bp

Genome Length

1680526 bp

Protein-coding Genes

1486 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xylulose-5-phosphate phosphoketolaseFC33_GL000477Q937F6Positive1625823 - 162823191677.2
gtp-binding protein lepaFC33_GL000478Q1WUE6Positive1628508 - 163034368441.9
hypothetical proteinFC33_GL000479Not AvailablePositive1630333 - 16305909790.65
pep synthetase regulatory proteinFC33_GL000480Q1WU26Negative1630630 - 163143930157.0
atp-dependent helicase deoxyribonuclease subunit bFC33_GL000481Q1WRR9Positive1631635 - 1635507148931.0
atp-dependent nuclease subunit aFC33_GL000482Q1WRS0Positive1635509 - 1639558156030.0
hypothetical proteinFC33_GL000483Q1WU25Positive1639715 - 16399007463.1
gatb yqey domain-containing proteinFC33_GL000484P54464Positive1639932 - 164037816333.8
dipeptidaseFC33_GL000485Not AvailablePositive1640513 - 164194955771.2
hypothetical proteinFC33_GL000486Not AvailablePositive1642159 - 16424169867.48

Displaying genes 1561 – 1570 of 1611 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

74 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 74 metabolites

Health Effects

No health effects information available for this bacterium.