Secundilactobacillus paracollinoides DSM 15502 = JCM 11969

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Secundilactobacillus

Description

Secundilactobacillus paracollinoides DSM 15502, also known as JCM 11969, is characterized by having a single replicon. This trait is significant because it indicates a simplified genomic structure, which can influence the organism's replication and stability under various environmental conditions. The genome of this species is cataloged under the accession number AZFD00000000.1, providing a reference for further genetic studies and comparative genomics. As a member of the Lactobacillus genus, Secundilactobacillus paracollinoides is likely to play a role in fermentation processes, contributing to the production of lactic acid and other metabolites beneficial in food technology and probiotic applications. The presence of a single replicon may suggest a streamlined metabolic capability, which can be advantageous in specific ecological niches where resource availability fluctuates. In terms of ecological insight, the unique characteristics of Secundilactobacillus paracollinoides highlight its potential adaptability and specialized functions within microbial communities. This adaptability may allow it to thrive in environments such as fermented foods or the gastrointestinal tracts of certain hosts, where it could interact with other microbial species, influencing the overall microbiome dynamics. Further exploration of its specific ecological roles could provide valuable information on its contributions to both health and food preservation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusSecundilactobacillus
SpeciesSecundilactobacillus paracollinoides
StrainDSM 15502 = JCM 11969

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Secundilactobacillus paracollinoides DSM 15502 = JCM 11969 strain

Gene Summary

Adenine Count

923446 bp

Thymine Count

923108 bp

Guanine Count

816870 bp

Cytosine Count

810982 bp

Genome Length

3476642 bp

Protein-coding Genes

3077 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFC17_GL000484Not AvailablePositive1037702 - 103891043865.1
peptidase s58 dmpaFC17_GL000485Not AvailableNegative1038907 - 103999838499.9
peptidase m15d vanx d-ala-d-ala dipeptidaseFC17_GL000486Not AvailableNegative1040092 - 104068522651.3
hisj family histidinol phosphate phosphataseFC17_GL000487Not AvailablePositive1040800 - 104164531952.9
atp phosphoribosyltransferase, regulatory subunitFC17_GL000488Not AvailablePositive1042029 - 104316842064.9
atp phosphoribosyltransferaseFC17_GL000489Not AvailablePositive1043165 - 104380623662.9
histidinol dehydrogenaseFC17_GL000490Not AvailablePositive1043811 - 104509445788.4
imidazoleglycerol-phosphate dehydrataseFC17_GL000491Not AvailablePositive1045719 - 104630321349.4
imidazole glycerol phosphate synthase subunit hishFC17_GL000492Not AvailablePositive1046304 - 104693022599.2
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseFC17_GL000493Not AvailablePositive1046908 - 104763625446.6

Displaying genes 921 – 930 of 3154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.