Holzapfeliella floricola DSM 23037 = JCM 16512

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Holzapfeliella

Description

Holzapfeliella floricola, classified as DSM 23037 and JCM 16512, is characterized by having a single replicon, which suggests a streamlined genomic structure typical of certain microbial species. The genomic information for this organism is available under the accession AYZL00000000.1, providing a basis for further study and characterization. This microorganism is noteworthy for its ecological role, potentially interacting with floral environments, as indicated by its name, "floricola." While specific ecological interactions are not detailed, the association with flora may suggest a role in plant-microbe interactions, possibly influencing plant health or nutrient cycling. The presence of a single replicon may also imply certain advantages in terms of stability and efficiency in replication, which could be beneficial in its ecological niche. Understanding the genomic features and ecological roles of Holzapfeliella floricola could contribute to broader insights into microbial diversity and functionality in floral ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusHolzapfeliella
SpeciesHolzapfeliella floricola
StrainDSM 23037 = JCM 16512

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Holzapfeliella floricola DSM 23037 = JCM 16512 strain DSM 23037

Gene Summary

Adenine Count

420085 bp

Thymine Count

423943 bp

Guanine Count

220488 bp

Cytosine Count

224597 bp

Genome Length

1289346 bp

Protein-coding Genes

1222 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFC86_GL000239Not AvailablePositive29724 - 3043427015.2
metal ion transporter, metal ion family proteinFC86_GL000240Q38UX8Positive30568 - 3195350132.7
erfk ybis ycfs ynhg family proteinFC86_GL000241Not AvailablePositive32104 - 3346850220.9
hypothetical proteinFC86_GL000242A0QTK2Positive33490 - 3417925542.2
hypothetical proteinFC86_GL000243Q06240Positive34181 - 3531443450.1
serine-type d-ala-d-ala carboxypeptidaseFC86_GL000244P08750Positive35331 - 3664448308.6
udp-n-acetylmuramoylalanyl-d-glutamate-2, 6-diaminopimelate ligaseFC86_GL000245Q1G8B5Positive36706 - 3825657455.4
aspartate racemaseFC86_GL000246H8L901Positive38256 - 3900828683.5
1-phosphofructokinaseFC86_GL000247O31714Positive39110 - 4002432889.5
abc superfamily atp binding cassette transporter, abc proteinFC86_GL000248Q9CP24Positive40124 - 4079524820.9

Displaying genes 21 – 30 of 1266 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

63 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da

Displaying 1–10 of 63 metabolites

Health Effects

No health effects information available for this bacterium.