Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393

Gram-positiveRodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lacticaseibacillus

Description

Lacticaseibacillus casei DSM 20011 (also known as JCM 1134 and ATCC 393) is a Gram-positive, rod-shaped bacterium that exhibits a unique chain arrangement. This species is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. L. casei DSM 20011 is mesophilic, with an optimal growth temperature of 30°C, and it has a temperature range suitable for growth within mesophilic conditions. This bacterium is non-motile and possesses flagella, but does not utilize them for mobility. It has a singular membrane structure and contains three replicons, which is indicative of its genetic organization. L. casei DSM 20011 has been identified as a free-living organism, suggesting it can exist independently in its specialized habitat. In terms of its ecological role, Lacticaseibacillus casei is known for its involvement in fermentation processes, particularly in dairy products. Its ability to ferment lactose makes it significant in the production of various fermented foods, contributing to the development of flavor and preservation of these products. Overall, the traits of Lacticaseibacillus casei DSM 20011 underscore its importance in both food microbiology and ecological systems, where it plays a crucial role in the microbial community dynamics and fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLacticaseibacillus
SpeciesLacticaseibacillus casei
StrainDSM 20011 = JCM 1134 = ATCC 393

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393


Gene Summary

Adenine Count

753552 bp

Thymine Count

755071 bp

Guanine Count

659214 bp

Cytosine Count

649365 bp

Genome Length

2820682 bp

Protein-coding Genes

2593 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Transcriptional regulatorFC13_GL001087Q47836Negative1889168 - 188960516787.2
Transcriptional regulatorFC13_GL001088Not AvailableNegative1890111 - 18902725749.93
Hypothetical proteinFC13_GL001089Not AvailableNegative1890407 - 189084716687.4
AttlNot AvailableNot AvailablePositive1890559 - 1890570Not Available
Cytosine-specific methyltransferaseFC13_GL001090Not AvailableNegative1890918 - 18911488792.34
Hypothetical proteinFC13_GL001091Not AvailableNegative1891145 - 189153114576.0
Mismatch repair proteinFC13_GL001092Not AvailableNegative1891552 - 18917316971.04
Hypothetical proteinFC13_GL001093Not AvailableNegative1892040 - 189259120899.2
Hypothetical proteinFC13_GL001094Not AvailableNegative1892588 - 18928279146.04
Hypothetical proteinFC13_GL001096Not AvailableNegative1893202 - 18934569318.41

Displaying genes 1 – 10 of 1008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

59 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da

Displaying 1–10 of 59 metabolites

Health Effects

No health effects information available for this bacterium.