Pseudomonas mandelii PD30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas mandelii PD30 is characterized by possessing a single replicon, which is an important trait indicating its genomic organization. The genome of Pseudomonas mandelii PD30 is represented by the accession number AZQQ00000000.1. This specific genomic information allows for further analysis and understanding of the genetic makeup and potential functionalities of this strain. Pseudomonas species, including P. mandelii, are known for their metabolic diversity and ability to thrive in various environments, making them significant in ecological contexts. They are often studied for their roles in biogeochemical cycles and as biocontrol agents in agriculture. The single replicon structure suggests a streamlined genomic organization that may contribute to the adaptability and efficiency of this bacterium in its ecological niche. The biological insights derived from the genomic structure of Pseudomonas mandelii PD30 could be significant for its potential applications in biotechnology and environmental microbiology. Understanding its capabilities can enhance the utilization of this bacterium in bioremediation efforts or in agricultural practices, where it may serve beneficial roles in promoting plant health and soil quality. Overall, the characteristics of Pseudomonas mandelii PD30 highlight its relevance in both scientific research and practical applications within microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas mandelii
StrainPD30

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas mandelii PD30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas mandelii PD30 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

1371649 bp

Thymine Count

1369760 bp

Guanine Count

1975197 bp

Cytosine Count

1974459 bp

Genome Length

6691076 bp

Protein-coding Genes

6048 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyltransferaseV466_19590Not AvailablePositive4225260 - 422627338824.1
rna polymerase sigma70V466_19595Not AvailableNegative4226324 - 422687220534.6
peptide synthaseV466_19600Not AvailablePositive4227245 - 4240228480061.0
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseV466_19605Not AvailablePositive4240410 - 424123430217.5
dihydroneopterin aldolaseV466_19610Not AvailableNegative4241343 - 424211328036.1
peroxiredoxinV466_19615Not AvailableNegative4242089 - 424295531514.3
thiol:disulfide interchange proteinV466_19620Not AvailableNegative4242955 - 424469161518.2
transcriptional regulatorV466_19625Not AvailablePositive4244845 - 424552824875.0
sensor histidine kinaseV466_19630Not AvailablePositive4245528 - 424685048188.6
gcn5 family acetyltransferaseV466_19635Not AvailablePositive4247117 - 424760217930.7

Displaying genes 3991 – 4000 of 6200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.