Pseudomonas mandelii PD30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas mandelii PD30 is characterized by possessing a single replicon, which is an important trait indicating its genomic organization. The genome of Pseudomonas mandelii PD30 is represented by the accession number AZQQ00000000.1. This specific genomic information allows for further analysis and understanding of the genetic makeup and potential functionalities of this strain. Pseudomonas species, including P. mandelii, are known for their metabolic diversity and ability to thrive in various environments, making them significant in ecological contexts. They are often studied for their roles in biogeochemical cycles and as biocontrol agents in agriculture. The single replicon structure suggests a streamlined genomic organization that may contribute to the adaptability and efficiency of this bacterium in its ecological niche. The biological insights derived from the genomic structure of Pseudomonas mandelii PD30 could be significant for its potential applications in biotechnology and environmental microbiology. Understanding its capabilities can enhance the utilization of this bacterium in bioremediation efforts or in agricultural practices, where it may serve beneficial roles in promoting plant health and soil quality. Overall, the characteristics of Pseudomonas mandelii PD30 highlight its relevance in both scientific research and practical applications within microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas mandelii
StrainPD30

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas mandelii PD30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas mandelii PD30 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

1371649 bp

Thymine Count

1369760 bp

Guanine Count

1975197 bp

Cytosine Count

1974459 bp

Genome Length

6691076 bp

Protein-coding Genes

6048 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adp-heptose:lps heptosyl transferaseV466_06330Not AvailablePositive1381332 - 138239339292.9
glucosyltransferaseV466_06335Not AvailablePositive1382393 - 138351442142.7
lipopolysaccharide core heptose(i) kinase rfapV466_06340Not AvailablePositive1383514 - 138432030612.1
heptose kinase wappV466_06345Not AvailablePositive1384320 - 138505428776.4
lipopolysaccharide kinaseV466_06350Not AvailablePositive1385051 - 138580328462.9
serine/threonine protein kinaseV466_06355Not AvailablePositive1385803 - 138725454186.6
hypothetical proteinV466_06360Not AvailablePositive1387422 - 138775712131.7
3-deoxy-d-manno-octulosonic-acid transferaseV466_06365Not AvailablePositive1387829 - 138870733464.1
carbamoyltransferaseV466_06370Not AvailablePositive1388936 - 139069365477.7
glycosyl transferaseV466_06375Not AvailablePositive1390677 - 139180741396.0

Displaying genes 1361 – 1370 of 6200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.