Oceanisphaera profunda str. SM1222

sphere

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Oceanisphaera

Description

Oceanisphaera profunda strain SM1222 is a Gram-negative, spherical bacterium. It possesses a single replicon, indicating a streamlined genetic organization that is characteristic of certain bacterial species. The strain is cataloged under the accession number NZ_CP021377.1, which provides a reference point for genomic information and further studies. The Gram-negative classification of Oceanisphaera profunda indicates that it has a distinctive cell wall structure, which includes an outer membrane containing lipopolysaccharides. This structural feature may influence its interaction with the environment, including its response to antibiotics and its ecological role in marine ecosystems. The spherical shape of the organism could suggest specific adaptive strategies for buoyancy and nutrient acquisition in its aquatic habitat. Such morphology is often associated with bacteria that thrive in nutrient-limited environments, where surface area to volume ratio plays a crucial role in maximizing resource uptake. Understanding the traits of Oceanisphaera profunda str. SM1222 allows for insights into its potential ecological contributions, particularly in oceanic environments where it may participate in nutrient cycling and microbial community interactions. Its Gram-negative nature and morphological characteristics might enable it to occupy specific niches, influencing the dynamics of microbial populations and their ecological functions in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusOceanisphaera
SpeciesOceanisphaera profunda
StrainSM1222

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanisphaera profunda strain SM1222 chromosome, complete genome.

Gene Summary

Adenine Count

879629 bp

Thymine Count

882769 bp

Guanine Count

876420 bp

Cytosine Count

870042 bp

Genome Length

3508860 bp

Protein-coding Genes

2983 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseCBP31_RS12285Not AvailableNegative2773536 - 277440530881.3
lipoprotein insertase outer membrane protein lolbCBP31_RS12290Not AvailableNegative2774933 - 277550821751.9
glutamyl-trna reductaseCBP31_RS12295Not AvailablePositive2775632 - 277689146713.5
peptide chain release factor 1CBP31_RS12300Not AvailablePositive2776945 - 277803040453.6
peptide chain release factor n(5)-glutamine methyltransferaseCBP31_RS12305Not AvailablePositive2778070 - 277891230968.1
sirb1 family proteinCBP31_RS12310Not AvailablePositive2778905 - 277990337301.7
3-deoxy-8-phosphooctulonate synthaseCBP31_RS12315Not AvailablePositive2779926 - 278077430627.3
acyl-coa dehydrogenase fadeCBP31_RS12320Not AvailableNegative2781270 - 278375990308.3
d-sedoheptulose 7-phosphate isomeraseCBP31_RS12325Not AvailablePositive2784146 - 278472720922.0
class ii glutamine amidotransferaseCBP31_RS12330Not AvailablePositive2784733 - 278552429798.5

Displaying genes 2461 – 2470 of 3102 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.