Oceanisphaera profunda str. SM1222

sphere

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Oceanisphaera

Description

Oceanisphaera profunda strain SM1222 is a Gram-negative, spherical bacterium. It possesses a single replicon, indicating a streamlined genetic organization that is characteristic of certain bacterial species. The strain is cataloged under the accession number NZ_CP021377.1, which provides a reference point for genomic information and further studies. The Gram-negative classification of Oceanisphaera profunda indicates that it has a distinctive cell wall structure, which includes an outer membrane containing lipopolysaccharides. This structural feature may influence its interaction with the environment, including its response to antibiotics and its ecological role in marine ecosystems. The spherical shape of the organism could suggest specific adaptive strategies for buoyancy and nutrient acquisition in its aquatic habitat. Such morphology is often associated with bacteria that thrive in nutrient-limited environments, where surface area to volume ratio plays a crucial role in maximizing resource uptake. Understanding the traits of Oceanisphaera profunda str. SM1222 allows for insights into its potential ecological contributions, particularly in oceanic environments where it may participate in nutrient cycling and microbial community interactions. Its Gram-negative nature and morphological characteristics might enable it to occupy specific niches, influencing the dynamics of microbial populations and their ecological functions in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusOceanisphaera
SpeciesOceanisphaera profunda
StrainSM1222

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanisphaera profunda strain SM1222 chromosome, complete genome.

Gene Summary

Adenine Count

879629 bp

Thymine Count

882769 bp

Guanine Count

876420 bp

Cytosine Count

870042 bp

Genome Length

3508860 bp

Protein-coding Genes

2983 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna dihydrouridine synthase dusbCBP31_RS11685Not AvailableNegative2646012 - 264697735446.9
dha2 family efflux mfs transporter permease subunitCBP31_RS11690Not AvailableNegative2647120 - 264864655572.2
hlyd family secretion proteinCBP31_RS11695Not AvailableNegative2648744 - 264991641933.6
marr family winged helix-turn-helix transcriptional regulatorCBP31_RS11700Not AvailableNegative2649903 - 265036117073.3
50s ribosomal protein l11 methyltransferaseCBP31_RS11705Not AvailableNegative2650502 - 265137732389.8
sodium/pantothenate symporterCBP31_RS11710Not AvailableNegative2651531 - 265306653808.8
yhdt family proteinCBP31_RS15905Not AvailableNegative2653076 - 265345613895.2
acetyl-coa carboxylase biotin carboxylase subunitCBP31_RS11720Not AvailableNegative2653818 - 265515848910.2
acetyl-coa carboxylase biotin carboxyl carrier proteinCBP31_RS11725Not AvailableNegative2655169 - 265563016490.8
type ii 3-dehydroquinate dehydrataseCBP31_RS11730Not AvailableNegative2655667 - 265611616418.5

Displaying genes 2341 – 2350 of 3102 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.