Oceanisphaera profunda str. SM1222

sphere

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Oceanisphaera

Description

Oceanisphaera profunda strain SM1222 is a Gram-negative, spherical bacterium. It possesses a single replicon, indicating a streamlined genetic organization that is characteristic of certain bacterial species. The strain is cataloged under the accession number NZ_CP021377.1, which provides a reference point for genomic information and further studies. The Gram-negative classification of Oceanisphaera profunda indicates that it has a distinctive cell wall structure, which includes an outer membrane containing lipopolysaccharides. This structural feature may influence its interaction with the environment, including its response to antibiotics and its ecological role in marine ecosystems. The spherical shape of the organism could suggest specific adaptive strategies for buoyancy and nutrient acquisition in its aquatic habitat. Such morphology is often associated with bacteria that thrive in nutrient-limited environments, where surface area to volume ratio plays a crucial role in maximizing resource uptake. Understanding the traits of Oceanisphaera profunda str. SM1222 allows for insights into its potential ecological contributions, particularly in oceanic environments where it may participate in nutrient cycling and microbial community interactions. Its Gram-negative nature and morphological characteristics might enable it to occupy specific niches, influencing the dynamics of microbial populations and their ecological functions in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusOceanisphaera
SpeciesOceanisphaera profunda
StrainSM1222

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanisphaera profunda strain SM1222 chromosome, complete genome.

Gene Summary

Adenine Count

879629 bp

Thymine Count

882769 bp

Guanine Count

876420 bp

Cytosine Count

870042 bp

Genome Length

3508860 bp

Protein-coding Genes

2983 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase assembly factor 2CBP31_RS10145Not AvailablePositive2307953 - 230822810872.0
protein ygfxCBP31_RS10150Not AvailablePositive2308197 - 230859515315.8
l-aspartate oxidaseCBP31_RS10155Not AvailableNegative2308787 - 231042760426.9
rna polymerase sigma factor rpoeCBP31_RS10160Not AvailablePositive2310769 - 231134721765.7
sigma-e factor negative regulatory proteinCBP31_RS10165Not AvailablePositive2311376 - 231201423204.0
mucb/rseb c-terminal domain-containing proteinCBP31_RS10170Not AvailablePositive2312133 - 231310735838.1
soxr reducing system rsec family proteinCBP31_RS10175Not AvailablePositive2313154 - 231361215821.4
translation elongation factor 4CBP31_RS10180Not AvailablePositive2313767 - 231556366129.8
signal peptidase iCBP31_RS10185Not AvailablePositive2315566 - 231648033812.6
ribonuclease iiiCBP31_RS10190Not AvailablePositive2316480 - 231714825040.4

Displaying genes 2031 – 2040 of 3102 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.