Oceanisphaera profunda str. SM1222

sphere

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Oceanisphaera

Description

Oceanisphaera profunda strain SM1222 is a Gram-negative, spherical bacterium. It possesses a single replicon, indicating a streamlined genetic organization that is characteristic of certain bacterial species. The strain is cataloged under the accession number NZ_CP021377.1, which provides a reference point for genomic information and further studies. The Gram-negative classification of Oceanisphaera profunda indicates that it has a distinctive cell wall structure, which includes an outer membrane containing lipopolysaccharides. This structural feature may influence its interaction with the environment, including its response to antibiotics and its ecological role in marine ecosystems. The spherical shape of the organism could suggest specific adaptive strategies for buoyancy and nutrient acquisition in its aquatic habitat. Such morphology is often associated with bacteria that thrive in nutrient-limited environments, where surface area to volume ratio plays a crucial role in maximizing resource uptake. Understanding the traits of Oceanisphaera profunda str. SM1222 allows for insights into its potential ecological contributions, particularly in oceanic environments where it may participate in nutrient cycling and microbial community interactions. Its Gram-negative nature and morphological characteristics might enable it to occupy specific niches, influencing the dynamics of microbial populations and their ecological functions in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusOceanisphaera
SpeciesOceanisphaera profunda
StrainSM1222

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanisphaera profunda strain SM1222 chromosome, complete genome.

Gene Summary

Adenine Count

879629 bp

Thymine Count

882769 bp

Guanine Count

876420 bp

Cytosine Count

870042 bp

Genome Length

3508860 bp

Protein-coding Genes

2983 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
high-affinity branched-chain amino acid abc transporter permease livhCBP31_RS06615Not AvailableNegative1522095 - 152301832712.1
branched-chain amino acid abc transporter substrate-binding proteinCBP31_RS06620Not AvailableNegative1523218 - 152433339539.0
l-threonine 3-dehydrogenaseCBP31_RS06625Not AvailableNegative1524709 - 152573437233.2
glycine c-acetyltransferaseCBP31_RS06630Not AvailableNegative1525731 - 152696043930.6
tetr/acrr family transcriptional regulatorCBP31_RS06635Not AvailableNegative1527057 - 152773125633.9
adp-glyceromanno-heptose 6-epimeraseCBP31_RS06640Not AvailablePositive1528137 - 152909035954.3
glycosyltransferase family 4 proteinCBP31_RS06645Not AvailablePositive1529090 - 153021141170.0
glycosyltransferaseCBP31_RS06650Not AvailableNegative1530581 - 153140831503.3
lipopolysaccharide heptosyltransferase iiCBP31_RS06655Not AvailablePositive1531608 - 153266339291.2
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseCBP31_RS06660Not AvailablePositive1532668 - 153392746999.7

Displaying genes 1321 – 1330 of 3102 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.