Oceanisphaera profunda str. SM1222

sphere

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Oceanisphaera

Description

Oceanisphaera profunda strain SM1222 is a Gram-negative, spherical bacterium. It possesses a single replicon, indicating a streamlined genetic organization that is characteristic of certain bacterial species. The strain is cataloged under the accession number NZ_CP021377.1, which provides a reference point for genomic information and further studies. The Gram-negative classification of Oceanisphaera profunda indicates that it has a distinctive cell wall structure, which includes an outer membrane containing lipopolysaccharides. This structural feature may influence its interaction with the environment, including its response to antibiotics and its ecological role in marine ecosystems. The spherical shape of the organism could suggest specific adaptive strategies for buoyancy and nutrient acquisition in its aquatic habitat. Such morphology is often associated with bacteria that thrive in nutrient-limited environments, where surface area to volume ratio plays a crucial role in maximizing resource uptake. Understanding the traits of Oceanisphaera profunda str. SM1222 allows for insights into its potential ecological contributions, particularly in oceanic environments where it may participate in nutrient cycling and microbial community interactions. Its Gram-negative nature and morphological characteristics might enable it to occupy specific niches, influencing the dynamics of microbial populations and their ecological functions in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusOceanisphaera
SpeciesOceanisphaera profunda
StrainSM1222

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanisphaera profunda strain SM1222 chromosome, complete genome.

Gene Summary

Adenine Count

879629 bp

Thymine Count

882769 bp

Guanine Count

876420 bp

Cytosine Count

870042 bp

Genome Length

3508860 bp

Protein-coding Genes

2983 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase-n subunit alphaCBP31_RS05125Not AvailablePositive1184687 - 1187749113264.0
formate dehydrogenase subunit betaCBP31_RS05130Not AvailablePositive1187759 - 118873034881.4
formate dehydrogenase subunit gammaCBP31_RS05135Not AvailablePositive1188714 - 118934624196.1
formate dehydrogenase accessory protein fdheCBP31_RS05140Not AvailablePositive1189460 - 119040435149.7
l-seryl-trna(sec) selenium transferaseCBP31_RS05145Not AvailablePositive1190404 - 119184952269.7
selenocysteine-specific translation elongation factorCBP31_RS05150Not AvailablePositive1191846 - 119375971101.8
formate dehydrogenase accessory sulfurtransferase fdhdCBP31_RS05160Not AvailablePositive1193937 - 119472228896.0
multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphataseCBP31_RS05165Not AvailablePositive1194963 - 119612343178.4
undecaprenyl-diphosphate phosphataseCBP31_RS05170Not AvailableNegative1196442 - 119723928430.7
dihydroneopterin aldolaseCBP31_RS05175Not AvailableNegative1197326 - 119768213333.1

Displaying genes 1021 – 1030 of 3102 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.