Glycomyces fuscus str. TRM 49117

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Glycomycetales

Family

Glycomycetaceae

Genus

Glycomyces

Description

Glycomyces fuscus str. TRM 49117 is characterized by a single replicon, indicating a streamlined genomic structure. This organism is cataloged under the accession number NYMS00000000.1, which provides a reference point for further study and identification within genetic databases. The significance of having a single replicon may suggest a certain level of genomic stability, which could potentially influence its adaptability and evolutionary strategies. In microbial ecology, such traits are often crucial for understanding how species interact with their environment and compete for resources. The study of Glycomyces fuscus str. TRM 49117 can contribute to our understanding of microbial diversity and specialization, particularly within its ecological niche. As a member of the Glycomyces genus, this strain may play a role in the degradation of complex carbohydrates, which is essential for nutrient cycling in various ecosystems. This ability to break down polysaccharides highlights the ecological importance of Glycomyces fuscus str. TRM 49117 in soil and other environments where organic matter turnover is critical for maintaining ecosystem health. Overall, the genomic characteristics of Glycomyces fuscus str. TRM 49117 can provide insights into its ecological roles, particularly in carbohydrate metabolism and nutrient cycling within its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGlycomycetales
FamilyGlycomycetaceae
GenusGlycomyces
SpeciesGlycomyces fuscus
StrainTRM 49117

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Glycomyces fuscus strain TRM 49117 Scaf63, whole genome shotgun

Gene Summary

Adenine Count

888638 bp

Thymine Count

891949 bp

Guanine Count

2390852 bp

Cytosine Count

2384066 bp

Genome Length

6555505 bp

Protein-coding Genes

5392 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s9CQJ94_20595Not AvailablePositive4772175 - 477268418422.5
phosphoglucosamine mutaseCQJ94_20600Not AvailablePositive4772849 - 477418645974.0
glucokinaseCQJ94_20605Not AvailablePositive4774482 - 477551336266.4
3-hydroxyacyl-coa dehydrogenaseCQJ94_20610Not AvailablePositive4775671 - 477644426475.5
enoyl-coa hydrataseCQJ94_20615Not AvailablePositive4776454 - 477721826614.9
glycosyl transferaseCQJ94_20620Not AvailableNegative4777369 - 4780083101975.0
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseCQJ94_20630Not AvailableNegative4782113 - 478357952565.3
nitrate reductaseCQJ94_20635Not AvailableNegative4784025 - 478559955547.9
tigr03842 family llm class f420-dependent oxidoreductaseCQJ94_20640Not AvailableNegative4785788 - 478679836629.4
dihydropyrimidinaseCQJ94_20645Not AvailableNegative4786814 - 478822350679.8

Displaying genes 3991 – 4000 of 5468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.