Glycomyces fuscus str. TRM 49117

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Glycomycetales

Family

Glycomycetaceae

Genus

Glycomyces

Description

Glycomyces fuscus str. TRM 49117 is characterized by a single replicon, indicating a streamlined genomic structure. This organism is cataloged under the accession number NYMS00000000.1, which provides a reference point for further study and identification within genetic databases. The significance of having a single replicon may suggest a certain level of genomic stability, which could potentially influence its adaptability and evolutionary strategies. In microbial ecology, such traits are often crucial for understanding how species interact with their environment and compete for resources. The study of Glycomyces fuscus str. TRM 49117 can contribute to our understanding of microbial diversity and specialization, particularly within its ecological niche. As a member of the Glycomyces genus, this strain may play a role in the degradation of complex carbohydrates, which is essential for nutrient cycling in various ecosystems. This ability to break down polysaccharides highlights the ecological importance of Glycomyces fuscus str. TRM 49117 in soil and other environments where organic matter turnover is critical for maintaining ecosystem health. Overall, the genomic characteristics of Glycomyces fuscus str. TRM 49117 can provide insights into its ecological roles, particularly in carbohydrate metabolism and nutrient cycling within its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGlycomycetales
FamilyGlycomycetaceae
GenusGlycomyces
SpeciesGlycomyces fuscus
StrainTRM 49117

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Glycomyces fuscus strain TRM 49117 Scaf63, whole genome shotgun

Gene Summary

Adenine Count

888638 bp

Thymine Count

891949 bp

Guanine Count

2390852 bp

Cytosine Count

2384066 bp

Genome Length

6555505 bp

Protein-coding Genes

5392 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor histidine kinaseCQJ94_06150Not AvailablePositive1442816 - 144391038446.3
dna-binding response regulatorCQJ94_06155Not AvailablePositive1443907 - 144450921951.4
exopolysaccharide biosynthesis proteinCQJ94_06160Not AvailableNegative1444541 - 144690180044.3
type 1 glutamine amidotransferase domain-containing proteinCQJ94_06165Not AvailableNegative1447041 - 144780227205.1
gentisate 1,2-dioxygenaseCQJ94_06170Not AvailableNegative1447738 - 144879938459.9
amino acid decarboxylaseCQJ94_06175Not AvailableNegative1448808 - 145026853595.6
hypothetical proteinCQJ94_06180Not AvailableNegative1450261 - 145057211905.8
hypothetical proteinCQJ94_06185Not AvailableNegative1450572 - 145121624056.1
hypothetical proteinCQJ94_06190Not AvailableNegative1452077 - 145294329671.3
hypothetical proteinCQJ94_06195Not AvailablePositive1453103 - 145398131717.9

Displaying genes 1211 – 1220 of 5468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.