Shigella dysenteriae WRSd3

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella dysenteriae WRSd3 is a Gram-negative, rod-shaped bacterium that belongs to the family of Enterobacteriaceae. It is characterized as a facultative anaerobe, meaning it can grow in both the presence and absence of oxygen. This organism is classified as a chemoorganotroph, utilizing organic compounds as its energy source. In terms of its physical characteristics, S. dysenteriae WRSd3 typically occurs in pairs or singles and possesses flagella, which are not utilized for motility due to the organism's non-motile nature. The bacterium has a mesophilic temperature range, with an optimal growth temperature of 37°C, which aligns with the human body temperature, reflecting its adaptation to a host-associated habitat. S. dysenteriae WRSd3 has a single replicon and is surrounded by two membranes, consistent with the structure of Gram-negative bacteria. The organism exhibits a free-living biotic relationship, indicating its ability to survive outside a host environment. Understanding the ecological role of Shigella dysenteriae WRSd3 is crucial, particularly in the context of its association with human hosts. As a pathogen, it is known to cause dysentery in humans, highlighting the importance of studying its traits and behaviors to inform public health strategies and control measures. Its adaptation to a host-associated habitat and its optimal growth temperature suggest a significant evolutionary relationship with its human host, emphasizing the need for ongoing surveillance and research into its pathogenic mechanisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella dysenteriae
StrainWRSd3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella dysenteriae WRSd3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella dysenteriae WRSd3 plasmid unnamed Contig1229, whole

Gene Summary

Adenine Count

1031889 bp

Thymine Count

1036212 bp

Guanine Count

1068092 bp

Cytosine Count

1061475 bp

Genome Length

4197686 bp

Protein-coding Genes

4888 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein ydcg precursorWRSd3_00659Not AvailablePositive597290 - 59894562751.3
hypothetical proteinWRSd3_00660Not AvailableNegative599140 - 60020539419.9
von willebrand factor type a domain proteinWRSd3_00661Not AvailableNegative600202 - 60140144663.7
hypothetical proteinWRSd3_00662Not AvailableNegative601331 - 60238938079.0
molybdate metabolism regulatorWRSd3_00663Not AvailableNegative602401 - 60349840549.9
succinate-semialdehyde dehydrogenaseWRSd3_00664Not AvailablePositive603541 - 6037838675.42
4-aminobutyrate aminotransferaseWRSd3_00665Not AvailablePositive603797 - 60424016266.7
4-aminobutyrate aminotransferaseWRSd3_00666Not AvailablePositive604249 - 60507629221.4
gaba-specific permeaseWRSd3_00667Not AvailablePositive605251 - 60671453416.9
transcriptional regulator, gntr family proteinWRSd3_00668Not AvailablePositive606717 - 60739725718.2

Displaying genes 661 – 670 of 4757 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.