Xanthomonas citri pv. glycines str. 8ra

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. glycines str. 8ra is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses flagella, which are essential for its motility. Notably, Xanthomonas citri pv. glycines str. 8ra has a unique genomic structure, consisting of two replicons, which contributes to its genetic diversity and adaptability. The two accessions associated with this strain are NZ_CP017189.2 and NZ_CP017188.2. These genomic sequences provide insights into the genetic makeup and potential pathogenic mechanisms of Xanthomonas citri pv. glycines str. 8ra, which is known to affect soybean crops. As a member of the Xanthomonadaceae family, this bacterium can cause significant agricultural damage, leading to economic impacts on soybean production. Understanding the traits of Xanthomonas citri pv. glycines str. 8ra is crucial for developing effective management strategies for controlling its spread and mitigating its effects on crops. The presence of flagella suggests that this bacterium can actively move towards favorable environments, which may enhance its survival and infection rates in agricultural settings. Overall, the detailed characterization of this strain underscores the importance of monitoring and researching Xanthomonas citri pv. glycines to protect plant health and agricultural productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. glycines 8ra

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. glycines str. 8ra
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. glycines str. 8ra plasmid pXAG27.8ra,

Gene Summary

Adenine Count

4986 bp

Thymine Count

5293 bp

Guanine Count

8241 bp

Cytosine Count

8095 bp

Genome Length

26615 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter large permeaseBHE84_RS00860Not AvailablePositive197479 - 19876244523.6
family 43 glycosylhydrolaseBHE84_RS00865Not AvailablePositive198958 - 20054158153.5
laci family dna-binding transcriptional regulatorBHE84_RS00870Not AvailablePositive200687 - 20174538321.1
5-dehydro-4-deoxy-d-glucuronate isomeraseBHE84_RS00890Not AvailablePositive202981 - 20383531250.9
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudBHE84_RS00895Not AvailablePositive204023 - 20477826160.3
rpib/laca/lacb family sugar-phosphate isomeraseBHE84_RS00900Not AvailablePositive205032 - 20568823445.9
gdsl-type esterase/lipase family proteinBHE84_RS00905Not AvailablePositive206053 - 20717140523.2
peptidase m61BHE84_RS00910Not AvailablePositive207352 - 20908262882.6
duf4375 domain-containing proteinBHE84_RS00915Not AvailableNegative209155 - 20979924292.0
phenylalanine 4-monooxygenaseBHE84_RS00920Not AvailableNegative209944 - 21083433436.6

Displaying genes 351 – 360 of 4670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.