Mogibacterium timidum ATCC 33093

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Anaerovoracaceae

Genus

Mogibacterium

Description

Mogibacterium timidum ATCC 33093 is a Gram-positive anaerobic bacterium. As an anaerobe, it thrives in environments devoid of oxygen, which is a characteristic trait that influences its habitat and ecological role. The organism possesses a single replicon, indicative of its genetic structure, and is cataloged under the accession number JALU00000000.1. Being a member of the bacterial domain, Mogibacterium timidum contributes to the microbial diversity within anaerobic ecosystems. Its Gram-positive nature suggests that it has a thick peptidoglycan layer in its cell wall, which may provide structural support and protection in its anaerobic niche. The ecological implications of Mogibacterium timidum's anaerobic metabolism are significant, as such organisms play essential roles in various biogeochemical cycles, including carbon and nitrogen cycles. They may contribute to processes such as fermentation and the degradation of organic materials in environments like soil and the gastrointestinal tracts of animals. Understanding the characteristics and behaviors of Mogibacterium timidum can provide insights into its ecological functions and its potential applications in microbiology, including waste treatment and bioremediation efforts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyAnaerovoracaceae
GenusMogibacterium
SpeciesMogibacterium timidum
StrainATCC 33093

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mogibacterium timidum ATCC 33093 ctg7180000003891, whole genome

Gene Summary

Adenine Count

519516 bp

Thymine Count

486448 bp

Guanine Count

427310 bp

Cytosine Count

372929 bp

Genome Length

1806210 bp

Protein-coding Genes

1657 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
electron transport complex, rnfabcdge type, d subunitHMPREF0581_0902Not AvailableNegative71309 - 7227734370.9
electron transport complex, rnfabcdge type, c subunitHMPREF0581_0903Not AvailableNegative72270 - 7358947700.9
orn/lys/arg decarboxylase, major domain proteinHMPREF0581_0904Not AvailableNegative73677 - 7550666003.9
serine--trna ligaseHMPREF0581_0905Not AvailableNegative76132 - 7740348094.1
glutamine synthetase catalytic domain proteinHMPREF0581_0906Not AvailableNegative77460 - 7937972377.3
pf03699 family proteinHMPREF0581_0907Not AvailableNegative79409 - 82342111409.0
zinc-ribbon domain proteinHMPREF0581_0908Not AvailableNegative82415 - 8490189991.7
Trna-lysNot AvailableNot AvailablePositive85366 - 85441Not Available
hypothetical proteinHMPREF0581_0910Not AvailableNegative86000 - 8655120620.2
amp-binding enzymeHMPREF0581_0911Not AvailableNegative86582 - 8846269881.3

Displaying genes 81 – 90 of 1706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

295 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 295 metabolites

Health Effects

No health effects information available for this bacterium.