Oligella urethralis DNF00040

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Oligella

Description

Oligella urethralis DNF00040 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a simplified genomic structure, which is a notable trait among bacteria. The reference accession for Oligella urethralis DNF00040 is JRNI00000000.1, which provides a genetic framework for further studies and comparisons with related species. The Gram-negative classification of Oligella urethralis DNF00040 suggests a specific cellular structure that includes an outer membrane composed of lipopolysaccharides, which may confer certain advantages in terms of environmental resilience and pathogenic potential. While the ecological roles or specific habitats of Oligella urethralis DNF00040 are not detailed in the provided information, Gram-negative bacteria are often found in diverse environments, including soil, water, and as part of the human microbiome. Understanding the characteristics of Oligella urethralis DNF00040 can provide insights into its potential interactions within its ecological niche. The single replicon may suggest a streamlined adaptation to its environment, possibly influencing its metabolic capabilities and ecological relationships. Further research into this organism could elucidate its role in microbial communities and its significance in health or disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusOligella
SpeciesOligella urethralis
StrainDNF00040

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oligella urethralis DNF00040 contig171, whole genome shotgun

Gene Summary

Adenine Count

672524 bp

Thymine Count

668271 bp

Guanine Count

570766 bp

Cytosine Count

580638 bp

Genome Length

2492199 bp

Protein-coding Genes

2091 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anthranilate synthase component iHMPREF2130_00215Not AvailablePositive51096 - 5261956263.4
anthranilate synthase component iiHMPREF2130_00220Not AvailablePositive52641 - 5321620870.8
anthranilate phosphoribosyltransferaseHMPREF2130_00225Not AvailablePositive53249 - 5428637343.2
indole-3-glycerol-phosphate synthaseHMPREF2130_00230Not AvailablePositive54305 - 5510529929.2
hydroxymethylglutaryl-coa lyaseHMPREF2130_00240Not AvailablePositive55593 - 5650131945.3
hypothetical proteinHMPREF2130_00245Not AvailableNegative56629 - 5753432365.0
peptide deformylaseHMPREF2130_00250Not AvailablePositive57697 - 5822119785.9
amp-dependent synthetaseHMPREF2130_00255Not AvailableNegative58313 - 5954845209.1
branched-chain amino acid abc transporter atp-binding proteinHMPREF2130_00260Not AvailableNegative59624 - 6047831598.2
abc transporter permeaseHMPREF2130_00265Not AvailableNegative60512 - 6184648921.3

Displaying genes 81 – 90 of 2161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.