Oligella urethralis DNF00040

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Oligella

Description

Oligella urethralis DNF00040 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a simplified genomic structure, which is a notable trait among bacteria. The reference accession for Oligella urethralis DNF00040 is JRNI00000000.1, which provides a genetic framework for further studies and comparisons with related species. The Gram-negative classification of Oligella urethralis DNF00040 suggests a specific cellular structure that includes an outer membrane composed of lipopolysaccharides, which may confer certain advantages in terms of environmental resilience and pathogenic potential. While the ecological roles or specific habitats of Oligella urethralis DNF00040 are not detailed in the provided information, Gram-negative bacteria are often found in diverse environments, including soil, water, and as part of the human microbiome. Understanding the characteristics of Oligella urethralis DNF00040 can provide insights into its potential interactions within its ecological niche. The single replicon may suggest a streamlined adaptation to its environment, possibly influencing its metabolic capabilities and ecological relationships. Further research into this organism could elucidate its role in microbial communities and its significance in health or disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusOligella
SpeciesOligella urethralis
StrainDNF00040

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oligella urethralis DNF00040 contig171, whole genome shotgun

Gene Summary

Adenine Count

672524 bp

Thymine Count

668271 bp

Guanine Count

570766 bp

Cytosine Count

580638 bp

Genome Length

2492199 bp

Protein-coding Genes

2091 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
miniconductance mechanosensitive channelHMPREF2130_03160Not AvailablePositive693625 - 69489947744.0
membrane proteinHMPREF2130_03165Not AvailablePositive694969 - 69622846196.2
dihydrofolate reductaseHMPREF2130_03170Not AvailableNegative696306 - 69680318124.7
thymidylate synthaseHMPREF2130_03175Not AvailableNegative696830 - 69760629985.6
peroxiredoxinHMPREF2130_03180Not AvailableNegative697670 - 69809215529.6
glycosyl transferaseHMPREF2130_03185Not AvailablePositive698754 - 69987241621.5
vi polysaccharide biosynthesis protein vipa/tvibHMPREF2130_03190Not AvailablePositive699907 - 70118147188.7
vi polysaccharide biosynthesis protein vipb/tvicHMPREF2130_03195Not AvailablePositive701219 - 70224437764.7
membrane proteinHMPREF2130_03200Not AvailablePositive702272 - 70359447745.0
glycosyl transferaseHMPREF2130_03205Not AvailablePositive703675 - 70479942932.1

Displaying genes 631 – 640 of 2161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.