Oligella urethralis DNF00040

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Oligella

Description

Oligella urethralis DNF00040 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a simplified genomic structure, which is a notable trait among bacteria. The reference accession for Oligella urethralis DNF00040 is JRNI00000000.1, which provides a genetic framework for further studies and comparisons with related species. The Gram-negative classification of Oligella urethralis DNF00040 suggests a specific cellular structure that includes an outer membrane composed of lipopolysaccharides, which may confer certain advantages in terms of environmental resilience and pathogenic potential. While the ecological roles or specific habitats of Oligella urethralis DNF00040 are not detailed in the provided information, Gram-negative bacteria are often found in diverse environments, including soil, water, and as part of the human microbiome. Understanding the characteristics of Oligella urethralis DNF00040 can provide insights into its potential interactions within its ecological niche. The single replicon may suggest a streamlined adaptation to its environment, possibly influencing its metabolic capabilities and ecological relationships. Further research into this organism could elucidate its role in microbial communities and its significance in health or disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusOligella
SpeciesOligella urethralis
StrainDNF00040

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oligella urethralis DNF00040 contig171, whole genome shotgun

Gene Summary

Adenine Count

672524 bp

Thymine Count

668271 bp

Guanine Count

570766 bp

Cytosine Count

580638 bp

Genome Length

2492199 bp

Protein-coding Genes

2091 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp-binding proteinHMPREF2130_00530Not AvailablePositive122835 - 12346122866.8
delta-aminolevulinic acid dehydrataseHMPREF2130_00535Not AvailablePositive123602 - 12461837298.8
dihydroorotate dehydrogenaseHMPREF2130_00540Not AvailablePositive124705 - 12504612230.6
hypothetical proteinHMPREF2130_00545Not AvailablePositive125043 - 12717275602.1
5-oxoprolinaseHMPREF2130_00550Not AvailablePositive127272 - 130925131347.0
c4-dicarboxylate abc transporter substrate-binding proteinHMPREF2130_00555Not AvailablePositive131013 - 13198735802.6
hypothetical proteinHMPREF2130_00560Not AvailablePositive132002 - 13256220504.3
c4-dicarboxylate abc transporter permeaseHMPREF2130_00565Not AvailablePositive132559 - 13386046189.6
modification methylaseHMPREF2130_00570Not AvailablePositive134053 - 13498835566.0
hypothetical proteinHMPREF2130_00575Not AvailableNegative135053 - 13542213669.5

Displaying genes 141 – 150 of 2161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.